Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   BIS30_RS17820 Genome accession   NZ_CP011051
Coordinates   3404313..3404777 (-) Length   154 a.a.
NCBI ID   WP_003218659.1    Uniprot ID   E0U3A0
Organism   Bacillus spizizenii strain T30     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 3399313..3409777
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BIS30_RS17800 (BIS30_17800) kinA 3399779..3401599 (+) 1821 WP_003218651.1 sporulation histidine kinase KinA -
  BIS30_RS17805 (BIS30_17805) - 3401609..3402790 (-) 1182 WP_003218653.1 aminotransferase A -
  BIS30_RS17810 (BIS30_17810) - 3402992..3403153 (-) 162 WP_003218655.1 hypothetical protein -
  BIS30_RS17815 (BIS30_17815) cheV 3403360..3404271 (+) 912 WP_003218657.1 chemotaxis protein CheV -
  BIS30_RS17820 (BIS30_17820) kre 3404313..3404777 (-) 465 WP_003218659.1 YkyB family protein Regulator
  BIS30_RS17825 (BIS30_17825) - 3404892..3406193 (-) 1302 WP_045589974.1 MFS transporter -
  BIS30_RS17830 (BIS30_17830) - 3406269..3406763 (-) 495 WP_079996611.1 L,D-transpeptidase family protein -
  BIS30_RS17835 (BIS30_17835) - 3406821..3407681 (-) 861 WP_003218664.1 metallophosphoesterase -
  BIS30_RS17840 (BIS30_17840) fadH 3407823..3408587 (+) 765 WP_003218667.1 2,4-dienoyl-CoA reductase -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17894.76 Da        Isoelectric Point: 10.4658

>NTDB_id=141816 BIS30_RS17820 WP_003218659.1 3404313..3404777(-) (kre) [Bacillus spizizenii strain T30]
MDDHAYTKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQKYVGMKEKPLVPNRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=141816 BIS30_RS17820 WP_003218659.1 3404313..3404777(-) (kre) [Bacillus spizizenii strain T30]
ATGGACGACCATGCATATACGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAATCGTACCGAAA
TCCTAAAGCTCAAATGTCTTTAACAAAAGCGAAACACCTGTTGCAAAAATATGTGGGCATGAAAGAAAAACCGCTTGTGC
CAAATCGCCAGCAGCCAGCTTATCATAAACCTGTTTTTAAAAAGCTTGGCGAGAGTTACTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB E0U3A0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

99.351

100

0.994

Multiple sequence alignment