Detailed information    

insolico Bioinformatically predicted

Overview


Name   coiA   Type   Machinery gene
Locus tag   BIS30_RS16460 Genome accession   NZ_CP011051
Coordinates   3161627..3162748 (+) Length   373 a.a.
NCBI ID   WP_229283711.1    Uniprot ID   -
Organism   Bacillus spizizenii strain T30     
Function   homologous recombination; DNA uptake (predicted from homology)   
Homologous recombination DNA binding and uptake

Genomic Context


Location: 3156627..3167748
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BIS30_RS16435 (BIS30_16435) - 3157260..3158474 (+) 1215 WP_079996334.1 MFS transporter -
  BIS30_RS16440 (BIS30_16440) - 3158652..3159230 (+) 579 WP_003224597.1 GNAT family N-acetyltransferase -
  BIS30_RS16445 (BIS30_16445) spx 3159411..3159806 (+) 396 WP_003224599.1 transcriptional regulator Spx -
  BIS30_RS16450 (BIS30_16450) - 3159849..3160505 (-) 657 WP_003224601.1 TerC family protein -
  BIS30_RS21010 - 3160689..3160814 (+) 126 WP_120698858.1 hypothetical protein -
  BIS30_RS16455 (BIS30_16455) mecA 3160781..3161437 (+) 657 WP_003224603.1 adaptor protein MecA Regulator
  BIS30_RS21015 - 3161432..3161553 (-) 122 Protein_3190 hypothetical protein -
  BIS30_RS16460 (BIS30_16460) coiA 3161627..3162748 (+) 1122 WP_229283711.1 competence protein CoiA family protein Machinery gene
  BIS30_RS16465 (BIS30_16465) pepF 3162978..3164807 (+) 1830 WP_171017002.1 oligoendopeptidase F -
  BIS30_RS16470 (BIS30_16470) - 3164845..3165012 (-) 168 WP_019713977.1 hypothetical protein -
  BIS30_RS16480 (BIS30_16480) spxH 3165326..3166225 (-) 900 WP_003224611.1 protease adaptor protein SpxH -
  BIS30_RS16485 (BIS30_16485) - 3166222..3166620 (-) 399 WP_003224612.1 group 2 truncated hemoglobin YjbI -
  BIS30_RS16490 (BIS30_16490) - 3166875..3167612 (-) 738 WP_003224614.1 lytic transglycosylase domain-containing protein -

Sequence


Protein


Download         Length: 373 a.a.        Molecular weight: 43511.59 Da        Isoelectric Point: 10.2265

>NTDB_id=141812 BIS30_RS16460 WP_229283711.1 3161627..3162748(+) (coiA) [Bacillus spizizenii strain T30]
MFHLLGARQSRKLKGRRFFCPVCGGELAVKLGLQKAPHFAHKQNKSCSIDIEPESAYHLEGKRQLYVWLKTQQASPILEP
YIKNINQRPDIMAKIKGRMLAVEYQCATLAPDVFQKRTEGFKQAGIIPQWIVGRSRLKRSAPSFYQLSAFHWQFINASSY
RELICYCPETRSFRRLSHIIPFYTNHSYSSVQTIPIHRAAANDLFFTEPTPAFQYSGWTKAIHRFRHKPHRFISKETNRL
RLLFYEKRQTPLSFLPTEVFVPVIKGAVFNSPVFVWQGFLYLFITDLGYKRAPIRFSAVLQQCKLHIHKKNISLRYKCSE
DCLSEAVKQYIDFLCKKGFLRETQKEVYVLNQPAEGVRSLQDLIESDRSCFIE

Nucleotide


Download         Length: 1122 bp        

>NTDB_id=141812 BIS30_RS16460 WP_229283711.1 3161627..3162748(+) (coiA) [Bacillus spizizenii strain T30]
ATATTTCACCTTCTAGGCGCTCGGCAAAGCCGGAAATTAAAGGGAAGACGATTCTTCTGCCCGGTGTGCGGAGGTGAGCT
TGCTGTGAAGCTCGGTCTCCAAAAAGCACCGCATTTCGCCCATAAACAGAACAAATCCTGTTCGATAGACATAGAACCGG
AAAGCGCCTACCACTTAGAAGGAAAGAGACAACTGTATGTATGGCTGAAAACGCAACAGGCTTCCCCGATATTAGAACCG
TATATCAAAAACATCAATCAAAGACCGGACATCATGGCAAAGATCAAGGGGCGCATGCTTGCTGTTGAGTATCAATGTGC
CACTCTTGCTCCAGATGTCTTTCAAAAACGGACAGAGGGCTTCAAACAAGCAGGAATCATCCCGCAGTGGATTGTGGGAC
GCAGCCGCTTAAAACGCTCTGCTCCATCCTTTTATCAGCTTTCTGCTTTCCATTGGCAGTTTATCAATGCAAGTTCATAC
AGGGAACTGATATGTTATTGCCCGGAAACACGTTCTTTCCGCCGGCTCAGCCACATCATTCCGTTTTACACAAACCATTC
TTATTCCTCTGTTCAAACGATCCCTATCCATCGGGCTGCTGCAAACGATCTTTTTTTTACTGAACCGACGCCCGCATTTC
AATATTCTGGCTGGACGAAAGCGATTCACCGTTTTCGCCATAAACCCCATCGATTTATCTCCAAGGAAACAAATCGCCTC
AGGCTGCTGTTTTATGAAAAGCGGCAGACGCCCCTTTCTTTTCTTCCGACGGAAGTGTTTGTCCCTGTTATAAAAGGGGC
TGTTTTTAATAGCCCGGTTTTTGTGTGGCAGGGGTTTCTATATCTGTTTATTACGGATCTGGGATATAAACGTGCGCCAA
TTCGCTTTTCAGCCGTTTTACAGCAGTGCAAACTGCACATTCATAAAAAGAACATTTCGCTCAGATACAAATGCAGCGAA
GATTGTCTTTCTGAAGCGGTGAAACAGTACATTGATTTTTTGTGCAAGAAGGGATTTTTAAGGGAGACTCAGAAAGAAGT
ATATGTGCTGAATCAGCCTGCAGAGGGCGTACGCTCATTACAGGATCTCATAGAAAGTGACCGCAGCTGTTTTATAGAAT
GA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Bacillus subtilis subsp. subtilis str. 168

88.472

100

0.885


Multiple sequence alignment