Detailed information
Bioinformatically predicted
Overview
| Name | nucA/comI | Type | Machinery gene |
| Locus tag | BIS30_RS12285 | Genome accession | NZ_CP011051 |
| Coordinates | 2332324..2332773 (-) | Length | 149 a.a. |
| NCBI ID | WP_136975843.1 | Uniprot ID | - |
| Organism | Bacillus spizizenii strain T30 | ||
| Function | cleavage of dsDNA into ssDNA (predicted from homology) DNA processing |
||
Genomic Context
Location: 2327324..2337773
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BIS30_RS21375 (BIS30_12245) | - | 2327732..2327859 (+) | 128 | Protein_2381 | hypothetical protein | - |
| BIS30_RS12250 (BIS30_12250) | - | 2327856..2328311 (+) | 456 | WP_003224877.1 | RDD family protein | - |
| BIS30_RS12255 (BIS30_12255) | - | 2328394..2328726 (+) | 333 | WP_003224878.1 | YckD family protein | - |
| BIS30_RS12260 (BIS30_12260) | - | 2328861..2329283 (+) | 423 | WP_003224879.1 | MarR family winged helix-turn-helix transcriptional regulator | - |
| BIS30_RS12265 (BIS30_12265) | - | 2329271..2329612 (+) | 342 | WP_003224880.1 | DUF3147 family protein | - |
| BIS30_RS12270 (BIS30_12270) | - | 2329632..2330360 (+) | 729 | WP_003224881.1 | AAA family ATPase | - |
| BIS30_RS12275 (BIS30_12275) | bglC | 2330433..2331866 (+) | 1434 | WP_003224917.1 | 6-phospho-beta-glucosidase | - |
| BIS30_RS12280 (BIS30_12280) | nin/comJ | 2331903..2332301 (-) | 399 | WP_003224919.1 | DNA-entry nuclease inhibitor | Regulator |
| BIS30_RS12285 (BIS30_12285) | nucA/comI | 2332324..2332773 (-) | 450 | WP_136975843.1 | DNA-entry nuclease | Machinery gene |
| BIS30_RS12290 (BIS30_12290) | tlpC | 2332946..2334669 (-) | 1724 | Protein_2390 | methyl-accepting chemotaxis protein TlpC | - |
| BIS30_RS12295 (BIS30_12295) | hxlB | 2334782..2335339 (-) | 558 | WP_003224927.1 | 6-phospho-3-hexuloisomerase | - |
| BIS30_RS12300 (BIS30_12300) | hxlA | 2335344..2335976 (-) | 633 | WP_003224929.1 | 3-hexulose-6-phosphate synthase | - |
| BIS30_RS12305 (BIS30_12305) | hxlR | 2336207..2336569 (+) | 363 | WP_003224931.1 | transcriptional activator HxlR | - |
Sequence
Protein
Download Length: 149 a.a. Molecular weight: 16392.32 Da Isoelectric Point: 4.3043
>NTDB_id=141794 BIS30_RS12285 WP_136975843.1 2332324..2332773(-) (nucA/comI) [Bacillus spizizenii strain T30]
MNITMDIIKTILLVIVVIAAAAVGLIKGDFFSADQKTSQTEEYDETIALPSDRYPETAKHIKDAINEGHSDVCTIDRDGA
EERREQSLKDVPPKTGYDRDEWPMAMCKEGGEGASVEYISPADNRGAGSWVGHQLTDYPDGTKVLFTIQ
MNITMDIIKTILLVIVVIAAAAVGLIKGDFFSADQKTSQTEEYDETIALPSDRYPETAKHIKDAINEGHSDVCTIDRDGA
EERREQSLKDVPPKTGYDRDEWPMAMCKEGGEGASVEYISPADNRGAGSWVGHQLTDYPDGTKVLFTIQ
Nucleotide
Download Length: 450 bp
>NTDB_id=141794 BIS30_RS12285 WP_136975843.1 2332324..2332773(-) (nucA/comI) [Bacillus spizizenii strain T30]
GTGAACATCACGATGGACATCATAAAAACGATACTTCTCGTCATCGTCGTCATAGCAGCTGCAGCTGTCGGCCTGATCAA
GGGAGACTTTTTCTCAGCTGATCAAAAAACGTCTCAAACTGAAGAATATGACGAAACAATTGCCCTCCCTTCTGACCGTT
ATCCCGAAACGGCCAAACATATTAAGGATGCGATAAATGAGGGGCACTCTGATGTGTGCACCATCGACAGAGACGGAGCT
GAGGAACGCCGCGAGCAATCATTAAAAGACGTACCGCCAAAAACGGGGTATGACAGAGATGAATGGCCAATGGCCATGTG
CAAAGAAGGCGGTGAGGGAGCTTCTGTAGAATACATTTCTCCTGCTGACAACCGCGGTGCAGGCTCTTGGGTCGGGCATC
AGCTTACCGACTATCCAGACGGCACAAAGGTTTTATTCACGATTCAGTAA
GTGAACATCACGATGGACATCATAAAAACGATACTTCTCGTCATCGTCGTCATAGCAGCTGCAGCTGTCGGCCTGATCAA
GGGAGACTTTTTCTCAGCTGATCAAAAAACGTCTCAAACTGAAGAATATGACGAAACAATTGCCCTCCCTTCTGACCGTT
ATCCCGAAACGGCCAAACATATTAAGGATGCGATAAATGAGGGGCACTCTGATGTGTGCACCATCGACAGAGACGGAGCT
GAGGAACGCCGCGAGCAATCATTAAAAGACGTACCGCCAAAAACGGGGTATGACAGAGATGAATGGCCAATGGCCATGTG
CAAAGAAGGCGGTGAGGGAGCTTCTGTAGAATACATTTCTCCTGCTGACAACCGCGGTGCAGGCTCTTGGGTCGGGCATC
AGCTTACCGACTATCCAGACGGCACAAAGGTTTTATTCACGATTCAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| nucA/comI | Bacillus subtilis subsp. subtilis str. 168 |
93.96 |
100 |
0.94 |