Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | BIS30_RS10595 | Genome accession | NZ_CP011051 |
| Coordinates | 2017992..2018276 (-) | Length | 94 a.a. |
| NCBI ID | WP_003218316.1 | Uniprot ID | G4NTA5 |
| Organism | Bacillus spizizenii strain T30 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2012992..2023276
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BIS30_RS10555 (BIS30_10555) | darA | 2013015..2013344 (+) | 330 | WP_003218295.1 | cyclic di-AMP receptor DarA | - |
| BIS30_RS10560 (BIS30_10560) | - | 2013357..2013797 (+) | 441 | WP_003218297.1 | YaaR family protein | - |
| BIS30_RS10565 (BIS30_10565) | holB | 2013809..2014798 (+) | 990 | WP_003218299.1 | DNA polymerase III subunit delta' | - |
| BIS30_RS10570 (BIS30_10570) | ricT | 2014801..2015628 (+) | 828 | WP_003218300.1 | competence/sporulation regulator complex protein RicT | - |
| BIS30_RS10575 (BIS30_10575) | yabA | 2015643..2016002 (+) | 360 | WP_003218308.1 | replication initiation-control protein YabA | - |
| BIS30_RS10580 (BIS30_10580) | - | 2016061..2016804 (+) | 744 | WP_003218310.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| BIS30_RS10585 (BIS30_10585) | - | 2016791..2017090 (+) | 300 | WP_003218311.1 | GIY-YIG nuclease family protein | - |
| BIS30_RS10590 (BIS30_10590) | rsmI | 2017065..2017943 (+) | 879 | WP_032727259.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| BIS30_RS10595 (BIS30_10595) | abrB | 2017992..2018276 (-) | 285 | WP_003218316.1 | transition state genes transcriptional regulator AbrB | Regulator |
| BIS30_RS10600 (BIS30_10600) | metG | 2018777..2020771 (+) | 1995 | WP_003218318.1 | methionine--tRNA ligase | - |
| BIS30_RS10605 (BIS30_10605) | - | 2020850..2021617 (+) | 768 | WP_003218320.1 | TatD family hydrolase | - |
| BIS30_RS10610 (BIS30_10610) | - | 2021863..2023086 (+) | 1224 | WP_003218322.1 | ubiquitin-like domain-containing protein | - |
Sequence
Protein
Download Length: 94 a.a. Molecular weight: 10494.25 Da Isoelectric Point: 6.3482
>NTDB_id=141789 BIS30_RS10595 WP_003218316.1 2017992..2018276(-) (abrB) [Bacillus spizizenii strain T30]
MKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEGAE
QIISEIQNQLQNLK
MKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEGAE
QIISEIQNQLQNLK
Nucleotide
Download Length: 285 bp
>NTDB_id=141789 BIS30_RS10595 WP_003218316.1 2017992..2018276(-) (abrB) [Bacillus spizizenii strain T30]
ATGAAATCTACTGGTATTGTACGTAAAGTTGATGAGCTAGGACGTGTAGTTATTCCTATCGAATTGCGTCGTACTCTTGG
AATCGCAGAAAAAGATGCTCTTGAAATTTATGTTGATGACGAAAAAATCATCCTTAAAAAATATAAACCAAACATGACTT
GCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGCGCTGAG
CAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
ATGAAATCTACTGGTATTGTACGTAAAGTTGATGAGCTAGGACGTGTAGTTATTCCTATCGAATTGCGTCGTACTCTTGG
AATCGCAGAAAAAGATGCTCTTGAAATTTATGTTGATGACGAAAAAATCATCCTTAAAAAATATAAACCAAACATGACTT
GCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGCGCTGAG
CAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |