Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   AT706_RS18615 Genome accession   NZ_CP013654
Coordinates   3623018..3623866 (+) Length   282 a.a.
NCBI ID   WP_015385221.1    Uniprot ID   -
Organism   Bacillus subtilis subsp. subtilis strain BSD-2     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 3618018..3628866
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AT706_RS18595 (AT706_18595) rsmG 3619833..3620552 (+) 720 WP_015385222.1 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG -
  AT706_RS18600 (AT706_18600) noc 3620674..3621525 (+) 852 WP_003226829.1 nucleoid occlusion protein -
  AT706_RS18605 (AT706_18605) yyaB 3621576..3622016 (-) 441 WP_003244005.1 PH domain-containing protein -
  AT706_RS18610 (AT706_18610) soj 3622264..3623025 (+) 762 WP_003219244.1 sporulation initiation inhibitor protein Soj -
  AT706_RS18615 (AT706_18615) spo0J 3623018..3623866 (+) 849 WP_015385221.1 stage 0 sporulation protein Spo0J Regulator
  AT706_RS18620 (AT706_18620) yyaC 3623905..3624522 (-) 618 WP_003226834.1 spore protease YyaC -
  AT706_RS18625 (AT706_18625) - 3624985..3626001 (+) 1017 WP_080109064.1 hypothetical protein -
  AT706_RS18630 (AT706_18630) yyzM 3626095..3626301 (+) 207 WP_003226838.1 DUF951 domain-containing protein -
  AT706_RS18635 (AT706_18635) yyaE 3626352..3628355 (+) 2004 WP_015385219.1 molybdopterin-dependent oxidoreductase -

Sequence

Protein


Download         Length: 282 a.a.        Molecular weight: 32240.19 Da        Isoelectric Point: 8.3881

>NTDB_id=141546 AT706_RS18615 WP_015385221.1 3623018..3623866(+) (spo0J) [Bacillus subtilis subsp. subtilis strain BSD-2]
MAKGLGKGINALFNQVDLSEETVEEIKITDLRPNPYQPRKHFDDEALAELKESVLQHGILQPLIVRKSLKGYDIVAGERR
FRAAKLAGLDTVPAIVRELSEALMREIALLENLQREDLSPLEEAQAYDSLLKHLDLTQEQLAKRLGKSRPHIANHLRLLT
LPENIQQLIAEGTLSMGHGRTLLGLKNKNKLEPLVQKVIAEQLNVRQLEQLIQQLNQNVPRETKKKEPVKDAVLKERESY
LQNYFGTTVNIKRQKKKGKIEIEFFSNEDLDRILELLSERES

Nucleotide


Download         Length: 849 bp        

>NTDB_id=141546 AT706_RS18615 WP_015385221.1 3623018..3623866(+) (spo0J) [Bacillus subtilis subsp. subtilis strain BSD-2]
ATGGCTAAAGGCCTTGGAAAAGGGATTAATGCGTTATTTAATCAGGTGGATTTGTCTGAAGAGACAGTTGAAGAAATTAA
AATTACCGATTTACGCCCTAATCCTTATCAGCCAAGAAAACACTTTGATGACGAGGCATTAGCTGAACTAAAAGAATCTG
TGCTGCAGCATGGCATTCTTCAGCCGCTTATCGTCAGAAAATCTTTAAAAGGCTATGATATTGTTGCGGGTGAACGGCGT
TTTCGAGCGGCAAAGCTGGCAGGTTTAGATACAGTTCCGGCCATAGTCCGTGAATTATCAGAGGCGTTAATGAGGGAAAT
TGCTTTATTAGAAAACCTTCAGCGTGAAGATTTATCTCCGCTTGAAGAGGCTCAGGCATATGACTCCTTGCTGAAACACT
TAGATCTCACGCAAGAACAGCTTGCCAAACGTCTTGGGAAAAGCAGACCGCATATTGCGAATCATTTAAGACTGCTGACA
CTGCCAGAAAATATTCAGCAGCTTATTGCCGAAGGTACGCTTTCTATGGGACATGGACGCACGCTTCTTGGCTTAAAAAA
CAAAAACAAGCTTGAACCGCTTGTACAAAAAGTGATTGCGGAGCAGCTTAATGTTCGCCAGCTTGAGCAGCTGATTCAGC
AGTTAAATCAGAATGTTCCACGTGAAACAAAGAAAAAAGAACCTGTGAAAGATGCAGTTCTTAAAGAACGGGAATCCTAT
CTCCAAAATTATTTTGGAACAACAGTTAATATTAAAAGACAGAAGAAAAAAGGCAAAATCGAAATTGAATTTTTCTCTAA
TGAAGACCTTGATCGGATTTTAGAGCTTTTGTCTGAACGAGAATCATAA

Domains

Predicted by InterProScan.

ParB/Sulfiredoxin domain (ParB_N)

(24-112)

HTH domain found in ParB protein (HTH_ParB)

(163-214)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

41.923

92.199

0.387