Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   AT706_RS08970 Genome accession   NZ_CP013654
Coordinates   1723231..1723848 (+) Length   205 a.a.
NCBI ID   WP_003238209.1    Uniprot ID   G4NVV3
Organism   Bacillus subtilis subsp. subtilis strain BSD-2     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1718231..1728848
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AT706_RS08935 (AT706_08935) ynzD 1718473..1718646 (+) 174 WP_010886518.1 aspartyl-phosphate phosphatase YnzD -
  AT706_RS08940 (AT706_08940) yneF 1718720..1718938 (-) 219 WP_003221221.1 YneF family protein -
  AT706_RS08945 (AT706_08945) sirA 1719024..1719470 (-) 447 WP_015383766.1 sporulation inhibitor of replication protein SirA -
  AT706_RS08950 (AT706_08950) recP/tkt 1719623..1721626 (-) 2004 WP_015483285.1 transketolase Machinery gene
  AT706_RS08955 (AT706_08955) ynzC 1721795..1722028 (-) 234 WP_003231595.1 DUF896 domain-containing protein -
  AT706_RS08960 (AT706_08960) dinL 1722092..1722745 (-) 654 WP_015383764.1 YneB family resolvase-like protein -
  AT706_RS08965 (AT706_08965) yneA 1722764..1723081 (-) 318 WP_003231598.1 cell division suppressor protein YneA -
  AT706_RS08970 (AT706_08970) dinR/lexA 1723231..1723848 (+) 618 WP_003238209.1 transcriptional repressor LexA Regulator
  AT706_RS21590 - 1724220..1724477 (-) 258 Protein_1775 hypothetical protein -
  AT706_RS08980 (AT706_08980) fosB 1724386..1724820 (-) 435 WP_015383763.1 metallothiol transferase FosB -
  AT706_RS08985 (AT706_08985) - 1725026..1725475 (+) 450 WP_015483284.1 YndM family protein -
  AT706_RS08990 (AT706_08990) pghL 1725502..1726260 (-) 759 WP_015383761.1 gamma-polyglutamate hydrolase PghL -
  AT706_RS08995 (AT706_08995) - 1726485..1726799 (-) 315 WP_174616646.1 hypothetical protein -
  AT706_RS09000 (AT706_09000) yndJ 1726886..1728526 (-) 1641 WP_015383759.1 YndJ family protein -

Sequence

Protein


Download         Length: 205 a.a.        Molecular weight: 22849.36 Da        Isoelectric Point: 5.1450

>NTDB_id=141471 AT706_RS08970 WP_003238209.1 1723231..1723848(+) (dinR/lexA) [Bacillus subtilis subsp. subtilis strain BSD-2]
MTKLSKRQLDILRFIKAEVKSKGYPPSVREIGEAVGLASSSTVHGHLARLETKGLIRRDPTKPRAIEILDEEVDIPQSQV
VNVPVIGKVTAGSPITAVENIEEYFPLPDRMVPPDEHVFMLEIMGDSMIDAGILDKDYVIVKQQNTANNGEIVVAMTEDD
EATVKRFYKEDTHIRLQPENPTMEPIILQNVSILGKVIGVFRTVH

Nucleotide


Download         Length: 618 bp        

>NTDB_id=141471 AT706_RS08970 WP_003238209.1 1723231..1723848(+) (dinR/lexA) [Bacillus subtilis subsp. subtilis strain BSD-2]
ATGACGAAGCTATCAAAAAGGCAACTTGATATCCTCCGTTTTATTAAAGCAGAGGTTAAATCAAAAGGATATCCGCCTTC
CGTTAGAGAGATCGGAGAGGCTGTCGGGCTTGCGTCCAGCTCTACTGTCCACGGCCATTTGGCCCGCTTGGAAACAAAAG
GACTGATCAGACGGGATCCGACAAAACCAAGAGCAATAGAAATTCTTGATGAAGAAGTAGACATTCCGCAAAGCCAGGTC
GTTAATGTACCGGTCATCGGGAAAGTCACGGCGGGATCTCCTATTACAGCAGTAGAAAATATTGAAGAATATTTTCCGCT
CCCTGACCGCATGGTTCCTCCAGACGAGCATGTATTTATGCTGGAGATTATGGGAGACAGTATGATAGATGCCGGTATTC
TCGATAAGGACTATGTCATCGTTAAACAGCAAAACACAGCGAACAATGGGGAAATTGTAGTTGCGATGACAGAAGATGAT
GAAGCAACTGTAAAACGATTCTATAAAGAGGATACCCACATTCGCTTGCAGCCTGAGAACCCAACGATGGAACCTATCAT
TTTGCAGAATGTCAGCATTCTAGGGAAAGTGATTGGCGTGTTCAGAACCGTCCATTAA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(1-65)

Peptidase S24-like (Peptidase_S24)

(84-198)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVV3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

100

100

1