Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   UP17_RS05935 Genome accession   NZ_CP011008
Coordinates   1264647..1264829 (+) Length   60 a.a.
NCBI ID   WP_061462091.1    Uniprot ID   A0AAW7IKD8
Organism   Peribacillus simplex strain SH-B26     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1259647..1269829
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  UP17_RS05920 (UP17_05930) - 1262227..1262418 (-) 192 WP_061462088.1 YjzD family protein -
  UP17_RS05925 (UP17_05935) - 1262715..1263437 (+) 723 WP_061462089.1 hypothetical protein -
  UP17_RS05930 (UP17_05940) - 1263540..1264373 (+) 834 WP_061462090.1 NAD(P)-dependent oxidoreductase -
  UP17_RS05935 (UP17_05945) comZ 1264647..1264829 (+) 183 WP_061462091.1 ComZ family protein Regulator
  UP17_RS05940 (UP17_05950) - 1264872..1265093 (-) 222 WP_061462092.1 hypothetical protein -
  UP17_RS05945 (UP17_05955) - 1265295..1266230 (+) 936 WP_061462093.1 beta-ketoacyl-ACP synthase III -
  UP17_RS05950 (UP17_05960) fabF 1266284..1267522 (+) 1239 WP_061462094.1 beta-ketoacyl-ACP synthase II -
  UP17_RS05955 (UP17_05965) - 1267655..1268425 (+) 771 WP_061462095.1 DUF2268 domain-containing putative Zn-dependent protease -
  UP17_RS05960 (UP17_05970) - 1268535..1269290 (+) 756 WP_034314514.1 YjbA family protein -

Sequence

Protein


Download         Length: 60 a.a.        Molecular weight: 6900.02 Da        Isoelectric Point: 4.4566

>NTDB_id=141371 UP17_RS05935 WP_061462091.1 1264647..1264829(+) (comZ) [Peribacillus simplex strain SH-B26]
MSSDKTLEFMGIAMKYFPEAKAKLEANGIPFSMEMAEPFMELFKNVMQEAYELGKQDAQR

Nucleotide


Download         Length: 183 bp        

>NTDB_id=141371 UP17_RS05935 WP_061462091.1 1264647..1264829(+) (comZ) [Peribacillus simplex strain SH-B26]
ATGAGTTCAGATAAAACTCTTGAATTTATGGGGATCGCCATGAAGTACTTCCCTGAGGCTAAAGCGAAGCTTGAAGCAAA
CGGGATTCCATTCTCAATGGAGATGGCAGAGCCATTCATGGAGCTCTTTAAAAACGTAATGCAAGAAGCTTATGAGCTTG
GGAAACAAGATGCTCAGCGTTAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

62.712

98.333

0.617

Multiple sequence alignment