Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   UP17_RS03750 Genome accession   NZ_CP011008
Coordinates   818314..819111 (+) Length   265 a.a.
NCBI ID   WP_061461727.1    Uniprot ID   A0AAW7IPE1
Organism   Peribacillus simplex strain SH-B26     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 813314..824111
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  UP17_RS03730 (UP17_03745) - 813554..814705 (+) 1152 WP_061461723.1 thiolase family protein -
  UP17_RS03735 (UP17_03750) - 814837..816417 (+) 1581 WP_061461724.1 fatty acid--CoA ligase -
  UP17_RS03740 (UP17_03755) - 816798..816983 (-) 186 WP_061461725.1 YfhD family protein -
  UP17_RS26020 - 817090..817212 (-) 123 WP_081088510.1 YfhE family protein -
  UP17_RS03745 (UP17_03760) - 817266..818186 (-) 921 WP_061461726.1 TIGR01777 family oxidoreductase -
  UP17_RS03750 (UP17_03765) recX 818314..819111 (+) 798 WP_061461727.1 recombination regulator RecX Regulator
  UP17_RS03755 (UP17_03770) - 819187..819498 (+) 312 WP_061461728.1 YfhH family protein -
  UP17_RS03760 (UP17_03775) - 819537..819692 (-) 156 WP_034305387.1 small, acid-soluble spore protein K -
  UP17_RS03765 (UP17_03780) - 819806..820072 (+) 267 WP_061461729.1 YfhJ family protein -
  UP17_RS03770 (UP17_03785) - 820129..821106 (-) 978 WP_061461730.1 metal-dependent hydrolase -
  UP17_RS03775 (UP17_03790) mutY 821312..822430 (+) 1119 WP_061461731.1 A/G-specific adenine glycosylase -
  UP17_RS03780 (UP17_03795) - 822536..822760 (-) 225 WP_061461732.1 hypothetical protein -
  UP17_RS03785 (UP17_03800) fabL 822829..823578 (+) 750 WP_061461733.1 enoyl-[acyl-carrier-protein] reductase FabL -
  UP17_RS03790 (UP17_03805) - 823661..823936 (+) 276 WP_061461734.1 gamma-type small acid-soluble spore protein -

Sequence

Protein


Download         Length: 265 a.a.        Molecular weight: 31378.17 Da        Isoelectric Point: 8.5671

>NTDB_id=141365 UP17_RS03750 WP_061461727.1 818314..819111(+) (recX) [Peribacillus simplex strain SH-B26]
MPNITKITTQKKRKDRYNIFVDEKYAFSVDEEVLLKFHLKKGMALDGLLLAEIQFHDEIQKAFTDALNYLSYRMRSESEI
RLYLKKKETEEPIIKEAIHKLYSFNYLDDLEFAKAYVRTHVNGGNKGPTTLKLELKEKGVQEKLVVEALKEYPYDIQIEH
ARKLAGKSVKKEKNISERALKLKVEQTLLRKGFPRDVILEALEDVAVEKDEDEQWDSLCHHAEKMKRRYKNHEGFEYEQK
MKQALYRKGFPIELIERYLSNPEMD

Nucleotide


Download         Length: 798 bp        

>NTDB_id=141365 UP17_RS03750 WP_061461727.1 818314..819111(+) (recX) [Peribacillus simplex strain SH-B26]
ATGCCAAACATAACAAAAATAACAACCCAAAAAAAACGTAAAGATCGTTATAACATTTTCGTTGATGAAAAGTATGCTTT
CAGTGTGGACGAAGAAGTGCTATTGAAATTTCATTTGAAAAAGGGTATGGCACTCGATGGCCTCCTCCTGGCTGAAATAC
AATTTCATGATGAAATCCAAAAAGCGTTTACTGATGCACTTAATTATTTATCATACCGGATGCGTTCGGAATCGGAAATT
CGCCTTTATTTGAAAAAGAAGGAAACAGAAGAGCCGATTATAAAGGAAGCGATACATAAGCTATACAGCTTTAACTATTT
AGACGACCTTGAATTTGCCAAGGCTTACGTACGGACCCATGTGAACGGAGGCAATAAAGGGCCCACTACCCTTAAGCTCG
AGCTTAAGGAAAAAGGGGTACAAGAAAAGTTGGTTGTCGAGGCATTGAAGGAATACCCCTATGATATTCAGATTGAGCAT
GCAAGGAAACTTGCTGGAAAATCGGTCAAAAAGGAAAAAAACATTTCGGAACGGGCATTAAAGCTAAAAGTTGAACAAAC
CTTGTTACGGAAAGGTTTCCCGAGAGATGTCATCCTTGAAGCACTTGAAGATGTGGCGGTTGAAAAGGATGAAGATGAAC
AATGGGATTCTCTATGCCACCATGCCGAAAAAATGAAACGCAGATATAAAAACCATGAAGGCTTCGAATATGAACAAAAA
ATGAAGCAGGCATTATACCGAAAAGGTTTTCCAATAGAATTGATTGAGCGTTATCTTTCCAATCCTGAAATGGATTAA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

48.669

99.245

0.483

Multiple sequence alignment