Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   UP12_RS05735 Genome accession   NZ_CP011007
Coordinates   1189359..1190024 (+) Length   221 a.a.
NCBI ID   WP_012009573.1    Uniprot ID   -
Organism   Bacillus pumilus strain SH-B9     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1184359..1195024
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  UP12_RS05705 (UP12_05705) - 1184682..1185770 (+) 1089 WP_106072466.1 ABC transporter ATP-binding protein -
  UP12_RS05710 (UP12_05710) - 1185772..1186692 (+) 921 WP_058014297.1 ATP-binding cassette domain-containing protein -
  UP12_RS05715 (UP12_05715) - 1186798..1187085 (+) 288 WP_058014296.1 hypothetical protein -
  UP12_RS05720 (UP12_05720) - 1187223..1187801 (+) 579 WP_058014295.1 GNAT family N-acetyltransferase -
  UP12_RS05725 (UP12_05725) spxA 1187995..1188390 (+) 396 WP_003211421.1 transcriptional regulator SpxA -
  UP12_RS05730 (UP12_05730) - 1188431..1189096 (-) 666 WP_058014294.1 TerC family protein -
  UP12_RS05735 (UP12_05735) mecA 1189359..1190024 (+) 666 WP_012009573.1 adaptor protein MecA Regulator
  UP12_RS05740 (UP12_05740) cls 1190110..1191630 (+) 1521 WP_058014293.1 cardiolipin synthase -
  UP12_RS05745 (UP12_05745) - 1191793..1192950 (+) 1158 WP_061407360.1 competence protein CoiA family protein -
  UP12_RS05750 (UP12_05750) pepF 1193165..1194991 (+) 1827 WP_284906233.1 oligoendopeptidase F -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 26405.18 Da        Isoelectric Point: 3.9851

>NTDB_id=141318 UP12_RS05735 WP_012009573.1 1189359..1190024(+) (mecA) [Bacillus pumilus strain SH-B9]
MEIERINEHTVKFYISYGDIEDRGFDREEIWYNRERSEELFWEVMDEVHEEEEFAVEGPLWIQVQALDKGLEIVVTKAQL
SKDGQKLELPIPEDKKDQTDEESLDALLDDFQKEEQDQEDHNEKDKKLQLQFVLKMDDFEDLIALSQLNMQDFTTSLYSF
ENRYYLYVDFHEDLSDEQVENKLSILLEYAHESVVSIYRLKEYGQLIIEGNALETIQQHFS

Nucleotide


Download         Length: 666 bp        

>NTDB_id=141318 UP12_RS05735 WP_012009573.1 1189359..1190024(+) (mecA) [Bacillus pumilus strain SH-B9]
ATGGAAATCGAAAGAATTAATGAACATACAGTGAAATTTTATATTTCCTACGGTGATATTGAAGACCGCGGATTTGACCG
TGAAGAGATTTGGTATAATCGTGAACGCAGTGAAGAGCTGTTTTGGGAAGTAATGGACGAAGTGCACGAAGAAGAAGAAT
TTGCAGTTGAGGGACCGCTTTGGATTCAAGTGCAGGCACTTGACAAAGGTCTTGAAATTGTCGTGACGAAAGCCCAACTT
TCTAAAGATGGACAAAAGCTCGAATTGCCGATTCCAGAAGATAAAAAAGATCAAACAGATGAAGAAAGTCTAGATGCACT
GCTTGATGATTTTCAAAAAGAAGAGCAGGATCAAGAAGATCATAATGAGAAGGACAAAAAACTTCAACTTCAATTTGTGT
TGAAAATGGATGACTTTGAAGATTTGATTGCACTTTCTCAATTAAATATGCAGGATTTTACCACAAGTTTATATTCGTTT
GAAAACCGTTATTATCTATATGTTGACTTCCACGAGGATTTGTCAGATGAGCAAGTGGAGAATAAGCTCAGCATTTTGCT
TGAATATGCTCATGAATCAGTGGTCAGCATTTACAGACTGAAAGAATACGGTCAGCTGATTATCGAAGGAAATGCCCTTG
AAACGATTCAACAGCACTTCTCGTAA

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-216)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

77.376

100

0.774

Multiple sequence alignment