Detailed information NTG0141073

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ATO45_RS00660
• Genome accession: NZ_CP013483
• Coordinates: 145993..147018 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain Y5
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 140993..152018

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ATO45_RS00640 (ATO45_00645)	metJ	142054..142371 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
ATO45_RS00645 (ATO45_00650)	yiiX	142555..143163 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
ATO45_RS00650 (ATO45_00655)	rpmE	143224..143436 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
ATO45_RS00655 (ATO45_00660)	priA	143639..145837 (+)	2199	WP_001333520.1	primosomal protein N'	Machinery gene
ATO45_RS00660 (ATO45_00665)	cytR	145993..147018 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
ATO45_RS00665 (ATO45_00670)	ftsN	147110..148069 (+)	960	WP_000068828.1	cell division protein FtsN	-
ATO45_RS00670 (ATO45_00675)	hslV	148162..148692 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
ATO45_RS00675 (ATO45_00680)	hslU	148702..150033 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
ATO45_RS00680 (ATO45_00685)	menA	150100..151026 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ATO45_RS00685 (ATO45_00690)	rraA	151119..151604 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
ATO45_RS00690 (ATO45_00695)	zapB	151689..151934 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=141073 ATO45_RS00660 WP_000644904.1 145993..147018(+) (cytR) [Escherichia coli strain Y5]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=141073 ATO45_RS00660 WP_000644904.1 145993..147018(+) (cytR) [Escherichia coli strain Y5]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628