Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   UB51_RS10935 Genome accession   NZ_CP010976
Coordinates   2535995..2536945 (-) Length   316 a.a.
NCBI ID   WP_044877325.1    Uniprot ID   A0A0D3V9C5
Organism   Paenibacillus sp. IHBB 10380     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2530995..2541945
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  UB51_RS10915 (UB51_10920) - 2531637..2532737 (-) 1101 WP_052675862.1 ATP-binding protein -
  UB51_RS28235 - 2532821..2532970 (-) 150 WP_160297255.1 hypothetical protein -
  UB51_RS10920 (UB51_10925) - 2533191..2534177 (-) 987 WP_044877322.1 siderophore ABC transporter substrate-binding protein -
  UB51_RS10925 (UB51_10930) - 2534296..2535054 (-) 759 WP_044877323.1 ABC transporter ATP-binding protein -
  UB51_RS10930 (UB51_10935) - 2535051..2535995 (-) 945 WP_044877324.1 iron chelate uptake ABC transporter family permease subunit -
  UB51_RS10935 (UB51_10940) ceuB 2535995..2536945 (-) 951 WP_044877325.1 ABC transporter permease Machinery gene
  UB51_RS10940 (UB51_10945) - 2537241..2538134 (+) 894 WP_044877326.1 C40 family peptidase -
  UB51_RS27110 - 2538231..2538362 (+) 132 WP_082063108.1 DUF4023 domain-containing protein -
  UB51_RS10945 (UB51_10950) - 2538423..2538656 (-) 234 WP_044877327.1 aspartyl-phosphate phosphatase Spo0E family protein -
  UB51_RS28240 - 2538847..2538993 (-) 147 WP_160297256.1 hypothetical protein -
  UB51_RS10950 (UB51_10955) - 2538956..2540371 (-) 1416 WP_044877328.1 hypothetical protein -
  UB51_RS10955 (UB51_10960) - 2540595..2541791 (-) 1197 WP_044877329.1 AI-2E family transporter -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 35009.34 Da        Isoelectric Point: 10.1265

>NTDB_id=141023 UB51_RS10935 WP_044877325.1 2535995..2536945(-) (ceuB) [Paenibacillus sp. IHBB 10380]
MKKRYLLITLVVFSFISIFIGVKDISPMEIFHLTEDQIQTLVISRVPRLISIIIAGMSMSIVGLIMQQLTRNKFVSPTTA
GTMDSARFGILVAMMVFSNATSIQKMLVAFVFALLGTFIFMKILDKVKYKDAIFIPLVGIMFGNVVGSITTFFAYKNDLI
QNMASWLQGDFSVILKGRYEMLYISIPLVIIAYIFANRFTIAGMGEDFAKNLGLNYKQVVNIGLVIVAAVSSIVILTVGM
IPFLGLIVPNIVTIYQGDNLKKSLSHTALLGAVFLLFCDILGRLIIYPYEISIGLTVGVIGSGIFIYLLMRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=141023 UB51_RS10935 WP_044877325.1 2535995..2536945(-) (ceuB) [Paenibacillus sp. IHBB 10380]
ATGAAAAAGAGATATTTGCTTATTACACTTGTTGTTTTTTCATTTATTTCGATCTTCATTGGGGTCAAAGACATTTCTCC
AATGGAAATCTTCCATTTAACAGAAGACCAGATTCAAACGTTGGTCATTAGTCGAGTTCCTCGTCTAATCAGTATTATCA
TAGCTGGAATGAGTATGAGTATTGTCGGATTAATTATGCAACAATTGACCCGTAATAAGTTTGTTTCGCCAACCACAGCA
GGAACGATGGATTCCGCAAGGTTCGGAATTCTAGTCGCCATGATGGTGTTCTCTAATGCTACATCGATCCAAAAAATGTT
AGTCGCATTTGTATTTGCACTTCTAGGTACATTTATCTTTATGAAGATTCTTGACAAGGTGAAATATAAAGATGCTATTT
TTATCCCGCTGGTAGGTATTATGTTCGGGAATGTAGTGGGCTCGATCACGACATTTTTTGCCTATAAGAATGATCTCATT
CAGAATATGGCTTCATGGTTGCAGGGGGATTTCTCAGTGATCTTGAAGGGCCGATATGAAATGTTATATATCAGTATTCC
GCTCGTCATTATTGCTTACATATTTGCTAATCGGTTCACTATTGCCGGTATGGGTGAGGATTTCGCTAAGAATTTAGGTT
TAAATTATAAGCAAGTCGTAAATATAGGGCTTGTCATTGTAGCGGCTGTGTCCTCAATCGTTATACTAACGGTCGGCATG
ATTCCCTTCTTGGGGCTGATTGTTCCGAATATTGTAACGATCTATCAAGGAGACAATCTGAAAAAGAGTCTCTCACATAC
CGCGTTATTAGGTGCGGTATTCCTTCTATTCTGTGACATCCTAGGTCGACTTATTATATATCCCTATGAAATATCCATTG
GTCTGACTGTTGGCGTTATAGGAAGCGGGATCTTTATTTACTTACTTATGAGAAGAAAGGCATATGCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0D3V9C5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

54.633

99.051

0.541

Multiple sequence alignment