Detailed information NTG0140849

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: UC35_RS07605
• Genome accession: NZ_CP010951
• Coordinates: 1583010..1584146 (+)
• Length: 378 a.a.
• NCBI ID: WP_061497710.1
• Uniprot ID: A0A127JS22
• Organism: Ramlibacter tataouinensis strain 5-10
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1578010..1589146

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
UC35_RS07580 (UC35_07590)	-	1578323..1579063 (+)	741	Protein_1521	alpha/beta fold hydrolase	-
UC35_RS07585 (UC35_07595)	coaD	1579080..1579577 (-)	498	WP_061497703.1	pantetheine-phosphate adenylyltransferase	-
UC35_RS07590 (UC35_07600)	rsmD	1579611..1580183 (-)	573	WP_082792929.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
UC35_RS07595 (UC35_07605)	-	1580194..1581570 (-)	1377	WP_061497706.1	M16 family metallopeptidase	-
UC35_RS07600 (UC35_07610)	-	1581572..1582981 (-)	1410	WP_061497708.1	M16 family metallopeptidase	-
UC35_RS07605 (UC35_07615)	pilA	1583010..1584146 (+)	1137	WP_061497710.1	signal recognition particle-docking protein FtsY	Machinery gene
UC35_RS07610 (UC35_07620)	selD	1584150..1585199 (+)	1050	WP_061497712.1	selenide, water dikinase SelD	-
UC35_RS07615 (UC35_07625)	cutA	1585189..1585524 (-)	336	WP_061497714.1	divalent-cation tolerance protein CutA	-
UC35_RS07620 (UC35_07630)	-	1585573..1586034 (+)	462	WP_061497716.1	DUF962 domain-containing protein	-
UC35_RS07625 (UC35_07635)	rpoH	1586234..1587166 (+)	933	WP_061497718.1	RNA polymerase sigma factor RpoH	-
UC35_RS07630 (UC35_07640)	-	1587327..1589039 (+)	1713	WP_145979374.1	7TM diverse intracellular signaling domain-containing protein	-

Sequence

Protein

• Length: 378 a.a.
• Molecular weight: 39358.23 Da
• Isoelectric Point: 5.4835

>NTDB_id=140849 UC35_RS07605 WP_061497710.1 1583010..1584146(+) (pilA) [Ramlibacter tataouinensis strain 5-10]
MFSFFRKKPAATPAPAPIATPEPAAPPPAPLAAPAEPPPASTAAPAATAAPVAAPARGSLIGTAVVEAIDIPVVPAVAPE
RQGWLNRLTVGLRKTGSSISQVFTGGQIDEAFYEELETALLMADTGVKATQHLLDEVKRRVQASGASRPVQAKNILVDAL
TQLLRPLQKDLVIGEHEPTVIMVAGVNGAGKTTSIGKLTKHLADEGESVLLAAADTFRAAAREQLAVWADRNTVEIVSQQ
GGDPAAVSFDAVSAGRARGKDVVLVDTAGRLPTQLHLMEELRKIKRVVQKAEPSGPHEVLLVIDGNTGQNALAQVKAFDD
ALGLTGLIVTKLDGTAKGGVLAAIAQEKPVPVYFIGVGEKLEDLETFDAREFALALLA

Nucleotide

• Length: 1137 bp

>NTDB_id=140849 UC35_RS07605 WP_061497710.1 1583010..1584146(+) (pilA) [Ramlibacter tataouinensis strain 5-10]
ATGTTCAGCTTCTTCCGGAAAAAGCCTGCCGCGACCCCCGCGCCAGCGCCCATCGCAACTCCCGAGCCGGCGGCGCCGCC
CCCGGCGCCCCTGGCGGCGCCCGCCGAGCCGCCGCCGGCTTCTACCGCCGCGCCCGCTGCGACGGCTGCGCCTGTGGCCG
CGCCCGCGCGCGGCAGCCTGATCGGCACGGCCGTCGTCGAGGCCATCGACATCCCGGTGGTGCCCGCCGTCGCGCCCGAG
CGCCAGGGCTGGCTCAATCGCCTGACGGTCGGCCTGCGCAAGACCGGCTCGTCCATCTCGCAGGTGTTCACCGGCGGCCA
GATCGACGAGGCCTTCTACGAAGAGCTGGAAACGGCCCTGCTGATGGCCGACACCGGCGTTAAGGCCACCCAGCACCTGC
TGGACGAGGTCAAGCGGCGGGTGCAGGCCAGCGGCGCCTCGCGCCCGGTGCAGGCCAAGAACATCCTGGTCGATGCGCTG
ACGCAGCTGCTGCGTCCGCTGCAAAAGGACCTGGTGATCGGCGAACACGAGCCCACCGTGATCATGGTCGCGGGCGTGAA
CGGCGCGGGCAAGACCACCTCCATCGGCAAGCTGACCAAGCACCTGGCCGACGAGGGCGAATCGGTGCTGCTGGCCGCGG
CCGACACCTTCCGGGCGGCGGCGCGCGAGCAGCTCGCGGTCTGGGCCGACCGCAACACCGTGGAAATCGTGAGCCAGCAG
GGCGGCGATCCCGCGGCCGTCAGCTTCGACGCCGTCAGCGCCGGCCGCGCGCGCGGCAAGGACGTGGTGCTGGTCGACAC
CGCCGGACGCCTGCCGACGCAGCTGCACCTGATGGAGGAGCTGCGCAAGATCAAGCGCGTGGTGCAGAAGGCGGAACCCA
GCGGCCCGCACGAGGTGCTGCTGGTGATCGACGGCAACACCGGCCAGAATGCGCTGGCCCAGGTCAAGGCCTTCGACGAC
GCGCTGGGCCTGACCGGCCTGATCGTGACCAAGCTCGATGGCACCGCCAAGGGTGGCGTGCTGGCCGCCATCGCCCAGGA
AAAGCCCGTGCCGGTCTATTTCATCGGCGTGGGCGAAAAGCTGGAAGATCTCGAGACCTTCGACGCACGCGAGTTCGCGC
TGGCGCTGCTCGCCTAA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (178-377)

• SRP54-type protein, helical bundle domain (SRP54_N) (96-160)

3D structure

• AlphaFold DB: A0A127JS22

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	50.238	100	0.558