Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | UC78_RS05175 | Genome accession | NZ_CP010906 |
| Coordinates | 1007316..1007618 (+) | Length | 100 a.a. |
| NCBI ID | WP_002855822.1 | Uniprot ID | A0A1E7NY14 |
| Organism | Campylobacter jejuni subsp. jejuni strain 35925 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1002316..1012618
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| UC78_RS05150 (UC78_1030) | rpsR | 1002678..1002938 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| UC78_RS05155 (UC78_1031) | lon | 1002999..1005374 (-) | 2376 | WP_002866098.1 | endopeptidase La | - |
| UC78_RS05160 (UC78_1032) | bamD | 1005391..1006038 (-) | 648 | WP_002877748.1 | outer membrane protein assembly factor BamD | - |
| UC78_RS05165 (UC78_1033) | fliW | 1006199..1006588 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| UC78_RS05170 (UC78_1034) | proC | 1006588..1007319 (+) | 732 | WP_044306077.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| UC78_RS05175 (UC78_1035) | ctsT | 1007316..1007618 (+) | 303 | WP_002855822.1 | transformation system protein | Machinery gene |
| UC78_RS05180 (UC78_1036) | - | 1007615..1008277 (+) | 663 | WP_002866103.1 | hypothetical protein | - |
| UC78_RS05185 (UC78_1037) | - | 1008274..1008726 (+) | 453 | WP_002869049.1 | hypothetical protein | - |
| UC78_RS05190 (UC78_1038) | hemD | 1008723..1009352 (-) | 630 | WP_044306078.1 | uroporphyrinogen-III synthase | - |
| UC78_RS05195 (UC78_1039) | thiE | 1009330..1009962 (-) | 633 | WP_002856400.1 | thiamine phosphate synthase | - |
| UC78_RS05200 (UC78_1040) | thiD | 1009952..1010764 (-) | 813 | WP_044306378.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| UC78_RS05205 (UC78_1041) | - | 1010761..1011447 (-) | 687 | WP_044306079.1 | 3-methyladenine DNA glycosylase | - |
| UC78_RS05210 (UC78_1042) | - | 1011444..1012205 (-) | 762 | WP_044306080.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12150.21 Da Isoelectric Point: 6.2957
>NTDB_id=140758 UC78_RS05175 WP_002855822.1 1007316..1007618(+) (ctsT) [Campylobacter jejuni subsp. jejuni strain 35925]
MKKAFILIESISAITIISLIFIGIFYYYTQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYTQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=140758 UC78_RS05175 WP_002855822.1 1007316..1007618(+) (ctsT) [Campylobacter jejuni subsp. jejuni strain 35925]
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACAATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATACTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACAATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATACTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
100 |
100 |
1 |