Detailed information
Bioinformatically predicted
Overview
| Name | pilL-C | Type | Machinery gene |
| Locus tag | ASZ83_RS07795 | Genome accession | NZ_CP013315 |
| Coordinates | 1633458..1633838 (+) | Length | 126 a.a. |
| NCBI ID | WP_000045526.1 | Uniprot ID | Q6BBL2 |
| Organism | Vibrio cholerae strain M2140 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1628458..1638838
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ASZ83_RS07770 (ASZ83_01493) | - | 1629050..1629706 (+) | 657 | WP_000974695.1 | HEAT repeat domain-containing protein | - |
| ASZ83_RS07775 (ASZ83_01494) | - | 1629717..1630562 (+) | 846 | WP_001002907.1 | CheR family methyltransferase | - |
| ASZ83_RS07780 (ASZ83_01495) | - | 1630562..1630933 (+) | 372 | WP_000757478.1 | response regulator | - |
| ASZ83_RS07785 (ASZ83_01496) | - | 1630942..1633215 (+) | 2274 | WP_001178898.1 | chemotaxis protein CheA | - |
| ASZ83_RS07790 (ASZ83_01497) | - | 1633205..1633465 (+) | 261 | WP_001143862.1 | hypothetical protein | - |
| ASZ83_RS07795 (ASZ83_01498) | pilL-C | 1633458..1633838 (+) | 381 | WP_000045526.1 | response regulator | Machinery gene |
| ASZ83_RS07800 (ASZ83_01499) | - | 1633846..1635081 (+) | 1236 | WP_000621946.1 | methyl-accepting chemotaxis protein | - |
| ASZ83_RS07805 (ASZ83_01500) | - | 1635136..1635450 (-) | 315 | WP_000312387.1 | DMT family transporter | - |
| ASZ83_RS07810 (ASZ83_01501) | - | 1635596..1637110 (-) | 1515 | WP_000411504.1 | cryptochrome/deoxyribodipyrimidine photo-lyase family protein | - |
| ASZ83_RS07815 (ASZ83_01502) | - | 1637266..1638672 (-) | 1407 | WP_000545341.1 | MDR family MFS transporter | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13674.04 Da Isoelectric Point: 9.8959
>NTDB_id=140560 ASZ83_RS07795 WP_000045526.1 1633458..1633838(+) (pilL-C) [Vibrio cholerae strain M2140]
MSKSILIVDDSSTVLMSVDAMLSKLGFQVEKAKDGVEAETRLKGGLKVNLIITDINMPRMDGIELISKIRAIASYRFTPI
LVLTTEQEQAKRNEARAKGATGYLVKPVTGDQLKAVIQQVLPGSIS
MSKSILIVDDSSTVLMSVDAMLSKLGFQVEKAKDGVEAETRLKGGLKVNLIITDINMPRMDGIELISKIRAIASYRFTPI
LVLTTEQEQAKRNEARAKGATGYLVKPVTGDQLKAVIQQVLPGSIS
Nucleotide
Download Length: 381 bp
>NTDB_id=140560 ASZ83_RS07795 WP_000045526.1 1633458..1633838(+) (pilL-C) [Vibrio cholerae strain M2140]
ATGTCTAAAAGCATTCTGATTGTTGATGACTCTAGTACTGTTCTTATGAGTGTCGATGCCATGCTCTCTAAACTGGGTTT
CCAAGTCGAGAAAGCAAAAGATGGCGTTGAAGCAGAAACTCGACTCAAAGGTGGTCTAAAAGTCAACCTCATCATTACCG
ACATCAATATGCCTCGTATGGATGGTATTGAGTTGATTAGCAAAATTCGTGCGATTGCTTCATATCGCTTTACCCCAATT
TTAGTGCTCACTACAGAACAAGAACAAGCCAAACGCAATGAGGCTCGCGCCAAAGGTGCAACAGGTTATTTAGTTAAGCC
CGTAACGGGAGATCAATTGAAAGCCGTGATTCAACAAGTTCTCCCAGGTAGTATTTCGTGA
ATGTCTAAAAGCATTCTGATTGTTGATGACTCTAGTACTGTTCTTATGAGTGTCGATGCCATGCTCTCTAAACTGGGTTT
CCAAGTCGAGAAAGCAAAAGATGGCGTTGAAGCAGAAACTCGACTCAAAGGTGGTCTAAAAGTCAACCTCATCATTACCG
ACATCAATATGCCTCGTATGGATGGTATTGAGTTGATTAGCAAAATTCGTGCGATTGCTTCATATCGCTTTACCCCAATT
TTAGTGCTCACTACAGAACAAGAACAAGCCAAACGCAATGAGGCTCGCGCCAAAGGTGCAACAGGTTATTTAGTTAAGCC
CGTAACGGGAGATCAATTGAAAGCCGTGATTCAACAAGTTCTCCCAGGTAGTATTTCGTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilL-C | Synechocystis sp. PCC 6803 |
39.2 |
99.206 |
0.389 |