Detailed information NTG0139920

Bioinformatically predicted

Overview

• Name: uvrA
• Type: Machinery gene
• Locus tag: FORC22_RS14500
• Genome accession: NZ_CP013248
• Coordinates: 2971605..2974427 (+)
• Length: 940 a.a.
• NCBI ID: WP_043044596.1
• Uniprot ID: -
• Organism: Vibrio parahaemolyticus strain FORC_022
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2966605..2979427

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FORC22_RS14480 (FORC22_2744)	csrD	2966634..2968643 (-)	2010	WP_011106082.1	RNase E specificity factor CsrD	-
FORC22_RS14485 (FORC22_2745)	ssb	2968884..2969414 (-)	531	WP_005466625.1	single-stranded DNA-binding protein	Machinery gene
FORC22_RS14490 (FORC22_2746)	qstR	2969693..2970337 (+)	645	WP_024701139.1	LuxR C-terminal-related transcriptional regulator	Regulator
FORC22_RS14495 (FORC22_2747)	galU	2970595..2971467 (+)	873	WP_005466627.1	UTP--glucose-1-phosphate uridylyltransferase GalU	-
FORC22_RS14500 (FORC22_2748)	uvrA	2971605..2974427 (+)	2823	WP_043044596.1	excinuclease ABC subunit UvrA	Machinery gene
FORC22_RS14505 (FORC22_2749)	-	2974495..2976273 (+)	1779	WP_071652426.1	PglL family O-oligosaccharyltransferase	-
FORC22_RS14510 (FORC22_2750)	-	2976403..2977524 (-)	1122	WP_015297341.1	pyridoxal-phosphate-dependent aminotransferase family protein	-

Sequence

Protein

• Length: 940 a.a.
• Molecular weight: 103943.17 Da
• Isoelectric Point: 6.4494

>NTDB_id=139920 FORC22_RS14500 WP_043044596.1 2971605..2974427(+) (uvrA) [Vibrio parahaemolyticus strain FORC_022]
MDKIEVRGARTHNLKDINLTIPRDKLTVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLSLMEKPDVDHIEGLS
PAISIEQKSTSHNPRSTVGTITEVYDYLRLLYARVGEPRCPTHHAPLAAQTVSQMVDKVLELPEGSKMMLLAPIVKERKG
EHVKTLENLAAQGFIRARIDGETCDLSDPPTLELHKKHTIEVVVDRFKVRPDLQQRLAESFETTLELSGGIAVIAPMDGD
GEEIIFSANFACPQCGYSMQELEPRLFSFNNPAGACGTCDGLGVQQYFDPSRVIQDDSLSLAQGAIRGWDQKNYYYFQML
TSLADHYGFDLHAPFNSLPKKTQDVILKGSGRTEIEFKYINDRGDIRVKRHPFEGILNTLERRYRDTESNSVREELAKYI
STKSCSSCDGTRLRLEARNVFIADTTLPEIVELSIADALTFFQTLKLEGQRAQIAEKVMKEINDRLQFLVNVGLNYLNLS
RSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLKTLTHLRDLGNTVLVVEHDEDAIRCADHVIDIG
PGAGVHGGNVVAEGTMDEIIANPNSLTGQYLSGAKEIAVPKERTPRDPKKTVELLGATGNNLKNVDLSIPVGLFSCITGV
SGSGKSTLINDTFFKIAHTQLNGATTAHPSPYKSIKGLEHFDKVIDIDQSPIGRTPRSNPATYTGIFTPIRELFAGTQES
RSRGYKPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDVYVPCDVCKGKRYNRETLEVRYKGKTIDEVLEMTVEDARTFFD
PVPAIARKLQTLMDVGLSYIRLGQAATTLSGGEAQRVKLARELSKRDTGKTLYILDEPTTGLHFHDIQQLLTVLHRLRDH
GNTVVVIEHNLDVIKTADWIIDLGPEGGQGGGEIIAQGTPEDVSQIEGSHTARFLKPMLK

Nucleotide

• Length: 2823 bp

>NTDB_id=139920 FORC22_RS14500 WP_043044596.1 2971605..2974427(+) (uvrA) [Vibrio parahaemolyticus strain FORC_022]
ATGGATAAAATAGAAGTTCGCGGTGCCCGAACCCATAACCTCAAAGACATCAATCTGACTATCCCTCGCGATAAACTGAC
AGTAATTACTGGGTTAAGCGGCTCCGGTAAGTCCTCTCTCGCATTCGATACCTTATATGCAGAAGGCCAACGACGTTATG
TCGAATCACTGTCTGCTTATGCTCGTCAGTTTTTGTCTCTTATGGAAAAACCAGATGTCGACCATATAGAAGGTTTGTCT
CCGGCGATTTCTATTGAACAAAAATCGACATCGCATAACCCTCGCTCAACCGTCGGTACCATCACCGAAGTTTACGACTA
CTTACGTCTGCTTTACGCTCGTGTTGGTGAACCACGCTGTCCTACTCACCACGCCCCATTAGCCGCACAAACTGTCAGCC
AGATGGTGGATAAAGTACTGGAACTGCCAGAAGGCAGCAAAATGATGCTGCTTGCTCCAATCGTAAAAGAGCGCAAAGGT
GAGCATGTAAAAACACTAGAAAACCTTGCCGCACAAGGTTTTATTCGAGCGCGTATTGACGGCGAAACTTGCGATCTTTC
AGATCCTCCAACACTTGAGCTACACAAAAAACACACCATTGAAGTCGTGGTCGACCGATTCAAAGTTCGCCCAGATCTGC
AACAACGTTTAGCAGAGTCATTTGAGACGACGCTAGAGCTTTCTGGTGGTATTGCGGTGATTGCTCCGATGGATGGCGAT
GGGGAAGAAATAATCTTTTCAGCGAACTTCGCTTGTCCGCAATGTGGTTACAGCATGCAAGAGCTGGAACCGAGATTGTT
CTCATTTAACAACCCAGCAGGCGCGTGTGGAACTTGTGATGGCTTGGGTGTACAACAGTATTTTGATCCAAGCCGAGTGA
TTCAAGATGACTCACTCAGTTTGGCACAAGGTGCTATTCGTGGTTGGGATCAAAAGAATTACTATTACTTCCAAATGCTG
ACTTCATTGGCGGATCATTATGGATTTGATTTGCACGCTCCGTTCAACTCTCTGCCAAAGAAAACGCAAGACGTTATTCT
CAAAGGCTCAGGCCGCACCGAGATCGAGTTTAAATACATCAATGATCGCGGCGACATTCGTGTAAAGCGCCACCCATTCG
AAGGGATTTTAAATACGCTTGAACGTCGTTACCGCGATACCGAGTCCAACTCAGTTCGAGAAGAGTTGGCTAAATACATC
TCGACAAAATCATGCTCAAGCTGTGACGGTACTCGTCTACGCCTTGAAGCACGTAATGTATTTATTGCCGATACCACCTT
ACCTGAGATCGTTGAGCTCAGTATTGCAGATGCCCTTACCTTCTTCCAAACACTCAAGCTAGAAGGTCAACGTGCGCAAA
TCGCAGAAAAGGTCATGAAGGAGATCAATGATCGACTACAGTTCCTTGTAAATGTGGGCTTGAACTACCTCAATTTATCC
CGGAGTGCAGAGACGCTATCCGGTGGCGAAGCACAACGCATTCGCTTAGCGAGCCAAATTGGTGCAGGTCTTGTTGGTGT
CATGTACGTATTAGATGAACCGTCGATTGGCCTCCACCAGCGTGATAACGAACGACTCCTAAAAACACTGACTCATTTGC
GCGATTTAGGTAATACCGTACTCGTGGTAGAACACGATGAAGATGCCATTCGCTGTGCCGATCACGTGATTGATATTGGC
CCGGGAGCGGGGGTGCACGGCGGTAATGTGGTTGCCGAAGGAACCATGGACGAGATCATCGCCAACCCGAACTCCCTCAC
AGGTCAATATCTAAGTGGTGCAAAAGAGATAGCAGTCCCTAAAGAGCGTACCCCTCGCGATCCAAAGAAAACCGTCGAAC
TACTAGGCGCAACAGGTAACAACCTGAAGAACGTCGACTTGTCTATTCCTGTCGGATTGTTTAGCTGTATTACTGGCGTG
TCTGGCTCCGGTAAATCAACCTTGATCAACGATACGTTCTTCAAAATTGCACACACCCAACTCAATGGCGCTACGACTGC
ACACCCATCGCCTTATAAGTCGATTAAAGGTCTAGAACATTTCGATAAGGTTATCGACATCGATCAAAGCCCAATTGGCC
GAACACCGCGCTCGAACCCTGCGACGTACACGGGAATCTTTACCCCTATTCGCGAGCTGTTTGCTGGTACGCAGGAATCA
CGTTCACGTGGTTACAAACCTGGCCGCTTTAGTTTTAATGTTCGCGGTGGTCGCTGTGAAGCTTGTCAGGGGGATGGTGT
TATCAAAGTCGAGATGCACTTCTTACCAGACGTGTACGTGCCATGTGATGTGTGTAAAGGGAAGCGCTATAACCGCGAAA
CACTGGAAGTACGCTACAAAGGCAAAACCATCGATGAAGTACTGGAAATGACCGTCGAGGATGCTCGCACCTTCTTCGAT
CCTGTTCCTGCGATTGCCCGCAAGCTGCAAACTCTAATGGACGTTGGTCTGTCTTACATTCGTTTAGGTCAAGCGGCAAC
CACATTATCAGGCGGCGAAGCGCAGCGAGTGAAATTGGCAAGAGAGCTATCCAAGCGTGATACGGGTAAAACCTTGTACA
TTCTGGATGAGCCAACAACTGGTCTGCATTTCCATGATATTCAGCAGTTGTTGACCGTACTTCATCGCCTGCGCGATCAC
GGGAATACCGTTGTGGTTATCGAACATAACTTGGACGTCATCAAAACAGCAGACTGGATCATCGACTTAGGACCAGAGGG
TGGACAAGGCGGCGGAGAGATCATTGCCCAGGGAACACCAGAAGATGTGTCTCAGATCGAAGGTTCGCACACAGCTCGAT
TCCTTAAGCCTATGTTGAAATAG

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (622-859)

• UvrA DNA-binding domain (UvrA_DNA-bind) (289-398)

• UvrA interaction domain (UvrA_inter) (130-237)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
uvrA	Streptococcus pneumoniae R6	57.856	100	0.58
uvrA	Streptococcus pneumoniae TIGR4	57.856	100	0.58
uvrA	Streptococcus pneumoniae D39	57.856	100	0.58