Detailed information
Bioinformatically predicted
Overview
| Name | clpE | Type | Regulator |
| Locus tag | SI82_RS03005 | Genome accession | NZ_CP010783 |
| Coordinates | 588484..590739 (-) | Length | 751 a.a. |
| NCBI ID | WP_003101055.1 | Uniprot ID | A0A3L8GMV5 |
| Organism | Streptococcus iniae strain YSFST01-82 | ||
| Function | repress competence development (at the early growth phase) (predicted from homology) Competence regulation |
||
Genomic Context
Location: 583484..595739
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SI82_RS02985 (SI82_02985) | - | 583588..584349 (+) | 762 | WP_003101047.1 | DivIVA domain-containing protein | - |
| SI82_RS02990 (SI82_02990) | ileS | 584604..587396 (+) | 2793 | WP_003101049.1 | isoleucine--tRNA ligase | - |
| SI82_RS02995 (SI82_02995) | - | 587552..587854 (-) | 303 | WP_003101050.1 | DUF1827 family protein | - |
| SI82_RS03000 (SI82_03000) | - | 587911..588357 (-) | 447 | WP_003101052.1 | NUDIX hydrolase | - |
| SI82_RS03005 (SI82_03005) | clpE | 588484..590739 (-) | 2256 | WP_003101055.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| SI82_RS03010 (SI82_03010) | - | 590997..591227 (+) | 231 | WP_003101057.1 | YkuJ family protein | - |
| SI82_RS03015 (SI82_03015) | - | 591345..592034 (+) | 690 | WP_003101059.1 | amino acid ABC transporter permease | - |
| SI82_RS03020 (SI82_03020) | - | 592031..592765 (+) | 735 | WP_003101061.1 | amino acid ABC transporter ATP-binding protein | - |
| SI82_RS03025 (SI82_03025) | - | 592841..593698 (+) | 858 | WP_003101063.1 | bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase | - |
| SI82_RS03030 (SI82_03030) | xseA | 593822..595150 (+) | 1329 | WP_003101065.1 | exodeoxyribonuclease VII large subunit | - |
| SI82_RS03035 (SI82_03035) | - | 595140..595355 (+) | 216 | WP_003101067.1 | exodeoxyribonuclease VII small subunit | - |
Sequence
Protein
Download Length: 751 a.a. Molecular weight: 84158.51 Da Isoelectric Point: 5.4009
>NTDB_id=139774 SI82_RS03005 WP_003101055.1 588484..590739(-) (clpE) [Streptococcus iniae strain YSFST01-82]
MLCQNCNLNEASIHLYTSLNGKQKQVDLCQNCYQIMKTDANNPILGGLHSKRQDSSISPFFDDFFGDLNHFKPFGQLPNT
PQGNNQQPPIRNDGQQQGHQQTTSAPAPQGLLEEFGINITDMAKNGDIDPVIGRDEEIVRVIEILNRRTKNNPVLIGEPG
VGKTAVVEGLAQKIVDGEVPHKLQHKQVIRLDVVSLVQGTGIRGQFEERMQKLMDEIRQRNDVILFIDEIHEIVGAGSAG
DGNMDAGNILKPALARGELQLVGATTLNEYRIIEKDAALERRMQPVKVDEPSVEETLIILKGIQAKYESYHHVKYSQDAI
EAAAHLSNRYIQDRFLPDKAIDLLDEAGSKMNLTLNFVDPKEIDKRLLEAENLKTQATRNEDYERAAYFRDQITKYKEMQ
KQKLDDQDIPIITEKTIEAIVEQKTNIPVGDLKEKEQSQLVHLADDLKKHVIGQDEAVTKIAKAIRRNRVGLGSPNRPIG
SFLFVGPTGVGKTELSKQLAIELFGSADNMIRFDMSEYMEKHAVSKLVGAPPGYVGYDEAGQLTEKVRRNPYSLILLDEV
EKAHPDVMHMFLQVLDDGRLTDGQGRTVSFKDTIIIMTSNAGTGKVEASVGFGATREGRSQSVLGQLGNFFSPEFMNRFD
GIIEFQALSKDNLLHIVDLMLDDINQRLEHNGLHLEVTQKVKEKLVDLGYDPKMGARPLRRTLQEHIEDAITDFYLENPS
EKDLRAIMTSNGQIVIKSNKKNEVTSYETPQ
MLCQNCNLNEASIHLYTSLNGKQKQVDLCQNCYQIMKTDANNPILGGLHSKRQDSSISPFFDDFFGDLNHFKPFGQLPNT
PQGNNQQPPIRNDGQQQGHQQTTSAPAPQGLLEEFGINITDMAKNGDIDPVIGRDEEIVRVIEILNRRTKNNPVLIGEPG
VGKTAVVEGLAQKIVDGEVPHKLQHKQVIRLDVVSLVQGTGIRGQFEERMQKLMDEIRQRNDVILFIDEIHEIVGAGSAG
DGNMDAGNILKPALARGELQLVGATTLNEYRIIEKDAALERRMQPVKVDEPSVEETLIILKGIQAKYESYHHVKYSQDAI
EAAAHLSNRYIQDRFLPDKAIDLLDEAGSKMNLTLNFVDPKEIDKRLLEAENLKTQATRNEDYERAAYFRDQITKYKEMQ
KQKLDDQDIPIITEKTIEAIVEQKTNIPVGDLKEKEQSQLVHLADDLKKHVIGQDEAVTKIAKAIRRNRVGLGSPNRPIG
SFLFVGPTGVGKTELSKQLAIELFGSADNMIRFDMSEYMEKHAVSKLVGAPPGYVGYDEAGQLTEKVRRNPYSLILLDEV
EKAHPDVMHMFLQVLDDGRLTDGQGRTVSFKDTIIIMTSNAGTGKVEASVGFGATREGRSQSVLGQLGNFFSPEFMNRFD
GIIEFQALSKDNLLHIVDLMLDDINQRLEHNGLHLEVTQKVKEKLVDLGYDPKMGARPLRRTLQEHIEDAITDFYLENPS
EKDLRAIMTSNGQIVIKSNKKNEVTSYETPQ
Nucleotide
Download Length: 2256 bp
>NTDB_id=139774 SI82_RS03005 WP_003101055.1 588484..590739(-) (clpE) [Streptococcus iniae strain YSFST01-82]
ATGCTTTGTCAAAACTGTAACTTAAACGAAGCTTCCATTCACTTGTATACAAGCTTAAATGGTAAGCAAAAACAAGTCGA
TTTATGTCAAAATTGCTATCAAATTATGAAAACAGATGCTAACAATCCAATTTTGGGAGGTCTTCATTCTAAAAGACAAG
ATTCTTCTATCAGTCCTTTCTTTGATGATTTTTTTGGTGATTTAAATCATTTTAAACCCTTTGGTCAATTGCCAAACACT
CCGCAAGGCAACAACCAACAGCCCCCTATTAGAAACGACGGGCAACAACAAGGCCATCAGCAAACAACAAGCGCTCCTGC
TCCTCAAGGACTTCTTGAAGAGTTTGGTATCAATATTACAGATATGGCTAAAAATGGTGATATTGACCCGGTTATCGGAC
GTGATGAGGAAATCGTGCGTGTTATCGAAATTTTAAACCGTAGAACGAAAAATAATCCCGTTTTGATTGGTGAACCTGGC
GTTGGGAAAACAGCAGTTGTCGAAGGCTTGGCACAAAAGATTGTTGATGGAGAAGTCCCTCACAAACTCCAGCATAAACA
AGTTATCCGCCTAGATGTGGTCAGTCTTGTTCAAGGAACTGGCATTCGTGGTCAATTTGAAGAGCGTATGCAAAAACTGA
TGGATGAAATCCGTCAACGCAATGATGTCATCTTATTTATTGATGAAATCCATGAAATTGTTGGTGCTGGTAGCGCTGGC
GATGGCAATATGGATGCCGGTAATATTTTAAAACCTGCTCTAGCTCGTGGCGAGTTGCAATTAGTTGGTGCTACTACCCT
TAATGAATACCGTATCATTGAAAAAGATGCCGCTCTTGAGCGGCGAATGCAACCTGTTAAGGTAGATGAACCATCTGTTG
AAGAAACCCTTATTATTTTAAAAGGGATTCAGGCAAAATATGAAAGCTACCATCATGTTAAGTATAGCCAAGATGCTATT
GAAGCCGCAGCTCATTTATCAAATCGTTACATCCAAGATCGTTTCTTACCTGACAAGGCTATTGATCTTCTTGATGAGGC
GGGATCTAAAATGAACTTAACACTCAATTTTGTTGACCCTAAAGAAATTGATAAACGCTTGCTTGAAGCTGAAAATCTAA
AAACTCAAGCAACGCGTAATGAGGATTATGAACGCGCAGCATACTTCCGCGATCAAATTACCAAGTATAAAGAAATGCAA
AAGCAAAAATTGGATGATCAGGATATTCCTATTATTACCGAGAAAACCATTGAAGCAATTGTTGAGCAAAAAACCAATAT
TCCTGTTGGCGATTTGAAAGAAAAAGAGCAATCTCAATTGGTTCATTTGGCAGATGATTTGAAAAAACATGTTATTGGTC
AAGATGAGGCTGTCACAAAGATTGCTAAAGCTATTCGCCGCAACAGAGTGGGACTAGGCAGCCCTAATCGACCAATTGGC
TCCTTCCTTTTTGTTGGACCTACCGGTGTTGGGAAAACAGAATTGTCTAAACAATTAGCTATTGAACTTTTCGGTTCTGC
TGATAATATGATTCGATTTGACATGTCAGAATATATGGAAAAACACGCAGTATCAAAACTTGTCGGTGCTCCTCCAGGAT
ATGTTGGTTATGATGAAGCAGGTCAATTAACAGAAAAAGTTCGTCGTAACCCATACTCTCTTATCCTTTTAGATGAGGTT
GAAAAAGCACATCCAGATGTTATGCATATGTTCCTTCAAGTGTTAGATGATGGACGTTTAACAGATGGACAAGGCCGCAC
TGTCAGTTTCAAAGACACTATCATTATCATGACATCAAACGCAGGAACTGGTAAAGTCGAAGCCTCTGTTGGATTTGGTG
CTACTCGTGAGGGGCGTTCACAGTCTGTTTTAGGTCAACTCGGGAACTTCTTTAGCCCTGAATTCATGAACCGTTTTGAT
GGTATCATTGAATTCCAAGCACTTAGCAAGGATAATCTCTTACATATTGTTGATTTGATGTTAGATGATATTAATCAAAG
ACTTGAACACAACGGCCTTCATTTAGAGGTGACTCAAAAAGTAAAAGAAAAATTAGTTGATTTAGGCTATGATCCTAAAA
TGGGAGCTCGGCCATTGCGTCGTACCCTACAAGAACACATTGAAGATGCTATCACTGATTTTTACTTGGAAAATCCAAGC
GAAAAAGATTTACGCGCCATCATGACAAGTAATGGTCAGATTGTCATTAAATCAAATAAAAAGAATGAAGTGACAAGTTA
CGAAACACCACAATAA
ATGCTTTGTCAAAACTGTAACTTAAACGAAGCTTCCATTCACTTGTATACAAGCTTAAATGGTAAGCAAAAACAAGTCGA
TTTATGTCAAAATTGCTATCAAATTATGAAAACAGATGCTAACAATCCAATTTTGGGAGGTCTTCATTCTAAAAGACAAG
ATTCTTCTATCAGTCCTTTCTTTGATGATTTTTTTGGTGATTTAAATCATTTTAAACCCTTTGGTCAATTGCCAAACACT
CCGCAAGGCAACAACCAACAGCCCCCTATTAGAAACGACGGGCAACAACAAGGCCATCAGCAAACAACAAGCGCTCCTGC
TCCTCAAGGACTTCTTGAAGAGTTTGGTATCAATATTACAGATATGGCTAAAAATGGTGATATTGACCCGGTTATCGGAC
GTGATGAGGAAATCGTGCGTGTTATCGAAATTTTAAACCGTAGAACGAAAAATAATCCCGTTTTGATTGGTGAACCTGGC
GTTGGGAAAACAGCAGTTGTCGAAGGCTTGGCACAAAAGATTGTTGATGGAGAAGTCCCTCACAAACTCCAGCATAAACA
AGTTATCCGCCTAGATGTGGTCAGTCTTGTTCAAGGAACTGGCATTCGTGGTCAATTTGAAGAGCGTATGCAAAAACTGA
TGGATGAAATCCGTCAACGCAATGATGTCATCTTATTTATTGATGAAATCCATGAAATTGTTGGTGCTGGTAGCGCTGGC
GATGGCAATATGGATGCCGGTAATATTTTAAAACCTGCTCTAGCTCGTGGCGAGTTGCAATTAGTTGGTGCTACTACCCT
TAATGAATACCGTATCATTGAAAAAGATGCCGCTCTTGAGCGGCGAATGCAACCTGTTAAGGTAGATGAACCATCTGTTG
AAGAAACCCTTATTATTTTAAAAGGGATTCAGGCAAAATATGAAAGCTACCATCATGTTAAGTATAGCCAAGATGCTATT
GAAGCCGCAGCTCATTTATCAAATCGTTACATCCAAGATCGTTTCTTACCTGACAAGGCTATTGATCTTCTTGATGAGGC
GGGATCTAAAATGAACTTAACACTCAATTTTGTTGACCCTAAAGAAATTGATAAACGCTTGCTTGAAGCTGAAAATCTAA
AAACTCAAGCAACGCGTAATGAGGATTATGAACGCGCAGCATACTTCCGCGATCAAATTACCAAGTATAAAGAAATGCAA
AAGCAAAAATTGGATGATCAGGATATTCCTATTATTACCGAGAAAACCATTGAAGCAATTGTTGAGCAAAAAACCAATAT
TCCTGTTGGCGATTTGAAAGAAAAAGAGCAATCTCAATTGGTTCATTTGGCAGATGATTTGAAAAAACATGTTATTGGTC
AAGATGAGGCTGTCACAAAGATTGCTAAAGCTATTCGCCGCAACAGAGTGGGACTAGGCAGCCCTAATCGACCAATTGGC
TCCTTCCTTTTTGTTGGACCTACCGGTGTTGGGAAAACAGAATTGTCTAAACAATTAGCTATTGAACTTTTCGGTTCTGC
TGATAATATGATTCGATTTGACATGTCAGAATATATGGAAAAACACGCAGTATCAAAACTTGTCGGTGCTCCTCCAGGAT
ATGTTGGTTATGATGAAGCAGGTCAATTAACAGAAAAAGTTCGTCGTAACCCATACTCTCTTATCCTTTTAGATGAGGTT
GAAAAAGCACATCCAGATGTTATGCATATGTTCCTTCAAGTGTTAGATGATGGACGTTTAACAGATGGACAAGGCCGCAC
TGTCAGTTTCAAAGACACTATCATTATCATGACATCAAACGCAGGAACTGGTAAAGTCGAAGCCTCTGTTGGATTTGGTG
CTACTCGTGAGGGGCGTTCACAGTCTGTTTTAGGTCAACTCGGGAACTTCTTTAGCCCTGAATTCATGAACCGTTTTGAT
GGTATCATTGAATTCCAAGCACTTAGCAAGGATAATCTCTTACATATTGTTGATTTGATGTTAGATGATATTAATCAAAG
ACTTGAACACAACGGCCTTCATTTAGAGGTGACTCAAAAAGTAAAAGAAAAATTAGTTGATTTAGGCTATGATCCTAAAA
TGGGAGCTCGGCCATTGCGTCGTACCCTACAAGAACACATTGAAGATGCTATCACTGATTTTTACTTGGAAAATCCAAGC
GAAAAAGATTTACGCGCCATCATGACAAGTAATGGTCAGATTGTCATTAAATCAAATAAAAAGAATGAAGTGACAAGTTA
CGAAACACCACAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpE | Streptococcus mutans UA159 |
83.001 |
100 |
0.832 |
| clpE | Streptococcus pneumoniae Rx1 |
80.559 |
100 |
0.806 |
| clpE | Streptococcus pneumoniae D39 |
80.559 |
100 |
0.806 |
| clpE | Streptococcus pneumoniae R6 |
80.559 |
100 |
0.806 |
| clpE | Streptococcus pneumoniae TIGR4 |
80.426 |
100 |
0.804 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
75.066 |
100 |
0.754 |
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
51.897 |
87.75 |
0.455 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
45.372 |
87.75 |
0.398 |
| clpC | Streptococcus pneumoniae TIGR4 |
46.411 |
83.489 |
0.387 |
| clpC | Streptococcus pneumoniae Rx1 |
46.411 |
83.489 |
0.387 |
| clpC | Streptococcus pneumoniae D39 |
46.411 |
83.489 |
0.387 |
| clpC | Streptococcus mutans UA159 |
46.688 |
82.423 |
0.385 |
| clpC | Streptococcus thermophilus LMD-9 |
46.602 |
82.29 |
0.383 |
| clpC | Streptococcus thermophilus LMG 18311 |
46.278 |
82.29 |
0.381 |