Detailed information
Bioinformatically predicted
Overview
| Name | pilZ | Type | Machinery gene |
| Locus tag | ATC05_RS00305 | Genome accession | NZ_CP013245 |
| Coordinates | 62044..62400 (-) | Length | 118 a.a. |
| NCBI ID | WP_003091119.1 | Uniprot ID | A0A0H2ZD30 |
| Organism | Pseudomonas aeruginosa strain VA-134 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 57044..67400
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ATC05_RS00280 (ATC05_00280) | - | 57427..58059 (-) | 633 | WP_003091112.1 | DUF4823 domain-containing protein | - |
| ATC05_RS00285 (ATC05_00285) | - | 58124..59020 (-) | 897 | WP_003091113.1 | radical SAM protein | - |
| ATC05_RS00290 (ATC05_00290) | - | 59170..59808 (-) | 639 | WP_003091114.1 | TetR/AcrR family transcriptional regulator | - |
| ATC05_RS00295 (ATC05_00295) | - | 59894..61027 (+) | 1134 | WP_003160629.1 | aminotransferase class V-fold PLP-dependent enzyme | - |
| ATC05_RS00300 (ATC05_00300) | - | 61253..62029 (-) | 777 | WP_003091117.1 | TatD family hydrolase | - |
| ATC05_RS00305 (ATC05_00305) | pilZ | 62044..62400 (-) | 357 | WP_003091119.1 | PilZ domain-containing protein | Machinery gene |
| ATC05_RS00310 (ATC05_00310) | - | 62434..63420 (-) | 987 | WP_003104126.1 | DNA polymerase III subunit delta' | - |
| ATC05_RS00315 (ATC05_00315) | tmk | 63413..64045 (-) | 633 | WP_003091125.1 | dTMP kinase | - |
| ATC05_RS00320 (ATC05_00320) | mltG | 64074..65123 (-) | 1050 | WP_003104128.1 | endolytic transglycosylase MltG | - |
| ATC05_RS00325 (ATC05_00325) | pabC | 65129..65944 (-) | 816 | WP_003110198.1 | aminodeoxychorismate lyase | - |
| ATC05_RS00330 (ATC05_00330) | fabF | 65944..67188 (-) | 1245 | WP_003104132.1 | beta-ketoacyl-ACP synthase II | - |
Sequence
Protein
Download Length: 118 a.a. Molecular weight: 12903.98 Da Isoelectric Point: 9.9969
>NTDB_id=139749 ATC05_RS00305 WP_003091119.1 62044..62400(-) (pilZ) [Pseudomonas aeruginosa strain VA-134]
MSLPPNLGPRNGILSLTIKDKSVLYAAYMPFIRNGGLFIPTNKNYKLGDEVFMLLNLMEEPEKIPVAGKVVWITPKGAQG
NRAAGIGVQFNDGDNTARNKIETYLAGALKSDRPTHTM
MSLPPNLGPRNGILSLTIKDKSVLYAAYMPFIRNGGLFIPTNKNYKLGDEVFMLLNLMEEPEKIPVAGKVVWITPKGAQG
NRAAGIGVQFNDGDNTARNKIETYLAGALKSDRPTHTM
Nucleotide
Download Length: 357 bp
>NTDB_id=139749 ATC05_RS00305 WP_003091119.1 62044..62400(-) (pilZ) [Pseudomonas aeruginosa strain VA-134]
ATGAGTTTGCCACCCAATCTGGGGCCGCGTAACGGCATCCTGTCCTTGACCATCAAGGACAAGTCCGTGCTGTACGCCGC
CTACATGCCGTTCATCAGGAACGGCGGGCTGTTCATTCCCACCAACAAGAACTACAAGCTCGGCGACGAAGTCTTCATGC
TGCTCAACCTGATGGAAGAGCCGGAGAAGATCCCGGTGGCCGGCAAGGTCGTCTGGATCACCCCGAAGGGCGCCCAGGGC
AACCGTGCGGCTGGCATCGGCGTGCAGTTCAACGACGGTGACAACACCGCCCGCAACAAGATCGAAACCTACCTGGCCGG
GGCGCTGAAGTCGGACCGGCCGACCCACACGATGTAA
ATGAGTTTGCCACCCAATCTGGGGCCGCGTAACGGCATCCTGTCCTTGACCATCAAGGACAAGTCCGTGCTGTACGCCGC
CTACATGCCGTTCATCAGGAACGGCGGGCTGTTCATTCCCACCAACAAGAACTACAAGCTCGGCGACGAAGTCTTCATGC
TGCTCAACCTGATGGAAGAGCCGGAGAAGATCCCGGTGGCCGGCAAGGTCGTCTGGATCACCCCGAAGGGCGCCCAGGGC
AACCGTGCGGCTGGCATCGGCGTGCAGTTCAACGACGGTGACAACACCGCCCGCAACAAGATCGAAACCTACCTGGCCGG
GGCGCTGAAGTCGGACCGGCCGACCCACACGATGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilZ | Legionella pneumophila str. Paris |
49.074 |
91.525 |
0.449 |
| pilZ | Legionella pneumophila strain ERS1305867 |
49.074 |
91.525 |
0.449 |