Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | ABA1_RS08620 | Genome accession | NZ_CP010781 |
| Coordinates | 1801701..1802081 (+) | Length | 126 a.a. |
| NCBI ID | WP_000836914.1 | Uniprot ID | A0A098SJS3 |
| Organism | Acinetobacter baumannii strain A1 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1796701..1807081
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABA1_RS08590 (ABA1_01718) | kdsB | 1797604..1798365 (+) | 762 | WP_000680692.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
| ABA1_RS08595 (ABA1_01719) | - | 1798377..1799357 (+) | 981 | WP_001075416.1 | DNA polymerase III subunit delta' | - |
| ABA1_RS08600 (ABA1_01720) | - | 1799369..1799710 (+) | 342 | WP_001183027.1 | PilZ domain-containing protein | - |
| ABA1_RS08605 (ABA1_01721) | - | 1799728..1800501 (+) | 774 | WP_000497300.1 | TatD family hydrolase | - |
| ABA1_RS08610 (ABA1_01722) | - | 1800539..1801147 (+) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| ABA1_RS08615 (ABA1_01723) | - | 1801157..1801711 (+) | 555 | WP_000841373.1 | type II secretion system protein | - |
| ABA1_RS08620 (ABA1_01724) | xcpV | 1801701..1802081 (+) | 381 | WP_000836914.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| ABA1_RS08625 (ABA1_01725) | xcpW | 1802081..1802782 (+) | 702 | WP_000594579.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| ABA1_RS08630 (ABA1_01726) | gspK | 1802782..1803741 (+) | 960 | WP_000301478.1 | type II secretion system minor pseudopilin GspK | - |
| ABA1_RS08635 (ABA1_01727) | - | 1803971..1804567 (+) | 597 | WP_000908449.1 | 6-pyruvoyl trahydropterin synthase family protein | - |
| ABA1_RS08640 (ABA1_01728) | ung | 1804618..1805331 (+) | 714 | WP_001177527.1 | uracil-DNA glycosylase | - |
| ABA1_RS08645 (ABA1_01729) | - | 1805328..1806452 (+) | 1125 | WP_001983908.1 | enoyl-CoA hydratase/isomerase family protein | - |
| ABA1_RS08650 (ABA1_01730) | tadA | 1806459..1806962 (+) | 504 | WP_001997771.1 | tRNA adenosine(34) deaminase TadA | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 14074.34 Da Isoelectric Point: 10.0341
>NTDB_id=139733 ABA1_RS08620 WP_000836914.1 1801701..1802081(+) (xcpV) [Acinetobacter baumannii strain A1]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKRKVQNGITHMVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKRKVQNGITHMVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=139733 ABA1_RS08620 WP_000836914.1 1801701..1802081(+) (xcpV) [Acinetobacter baumannii strain A1]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCTGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACTCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAGTTTGTGGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACTCAAAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATC
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGAG
AAAAGTACAAAATGGCATTACACATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCTGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACTCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAGTTTGTGGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACTCAAAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATC
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGAG
AAAAGTACAAAATGGCATTACACATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
99.206 |
100 |
0.992 |