Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   APQ13_RS03575 Genome accession   NZ_CP013237
Coordinates   737516..739270 (-) Length   584 a.a.
NCBI ID   WP_002263294.1    Uniprot ID   Q8DUK4
Organism   Streptococcus mutans strain NG8 isolate Dental Plaque     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 732516..744270
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  APQ13_RS03545 (APQ13_03540) - 733039..733389 (+) 351 WP_002263648.1 DUF1304 domain-containing protein -
  APQ13_RS03550 (APQ13_03545) - 733446..734678 (-) 1233 WP_002289573.1 sensor histidine kinase -
  APQ13_RS03555 (APQ13_03550) - 734684..735370 (-) 687 WP_002263646.1 response regulator transcription factor -
  APQ13_RS03560 (APQ13_03555) - 735371..735994 (-) 624 WP_002268771.1 GTP pyrophosphokinase -
  APQ13_RS03565 (APQ13_03560) - 736234..736668 (-) 435 WP_019319662.1 hypothetical protein -
  APQ13_RS03570 (APQ13_03565) tpx 736834..737319 (-) 486 WP_002263295.1 thiol peroxidase -
  APQ13_RS03575 (APQ13_03570) rcrQ 737516..739270 (-) 1755 WP_002263294.1 ABC transporter ATP-binding protein Regulator
  APQ13_RS03580 (APQ13_03575) rcrP 739260..741062 (-) 1803 WP_002263293.1 ABC transporter ATP-binding protein Regulator
  APQ13_RS03585 (APQ13_03580) rcrR 741066..741500 (-) 435 WP_002263292.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  APQ13_RS03590 (APQ13_03585) queC 742052..742705 (+) 654 WP_002263291.1 7-cyano-7-deazaguanine synthase QueC -
  APQ13_RS03595 (APQ13_03590) queD 742705..743151 (+) 447 WP_002263290.1 6-carboxytetrahydropterin synthase QueD -
  APQ13_RS03600 (APQ13_03595) queE 743148..743864 (+) 717 WP_002263289.1 7-carboxy-7-deazaguanine synthase QueE -

Sequence

Protein


Download         Length: 584 a.a.        Molecular weight: 64590.66 Da        Isoelectric Point: 6.0636

>NTDB_id=139663 APQ13_RS03575 WP_002263294.1 737516..739270(-) (rcrQ) [Streptococcus mutans strain NG8 isolate Dental Plaque]
MENKKKSLLSQMAPYLKGYKALFGLAVIFTIVSSTITVIGPDRLKEMTDTMTKGLAGKIDLDKIGEIALTLALLYFAGAL
VSYTASFIVSTLIQKFSQRLRNAIADKINKVPLKYFDSHSQGDTLSRVTNDVDLMTQSFNQSLVSMVAAIILLIGSIFMM
IKTNGALAATAILSVFAGFVLSTVIMAKSQPLFKKQQANLADVSGYVEEVYSGHNVVSSYNAIQQSKKQFENLNDQLFAS
MWKSQFFSGIMMPLMQFIGNFGYVMVCIVGATMAINGDITMGTIVAFMTYVRIFTQPIAQIAQGITQLQSANAAMGRVFE
FLDEEEIEDENHKVKQLEKVEGNVNFDNVFFGYSPDKTIIHDFSAHAKAGQKIAIVGPTGAGKTTIVNLLMRFYEVDRGM
ISIDGVNIHDMTRKEVHDAFAMVLQDTWLFEGTVKENLIYNQKHITDEQVIAAAKAVGVHHFIKTLPKGYDTVLDDSVTL
SVGQKQLLTIARALLKDAPLLILDEATSSVDTRTEELIQRAMDHLMEGRTSFVIAHRLSTIRNADLILVMRDGNIIEQGS
HDQLMAENGFYADLYNSQFTEEVA

Nucleotide


Download         Length: 1755 bp        

>NTDB_id=139663 APQ13_RS03575 WP_002263294.1 737516..739270(-) (rcrQ) [Streptococcus mutans strain NG8 isolate Dental Plaque]
ATGGAAAATAAGAAGAAATCATTATTAAGCCAAATGGCTCCTTACCTTAAAGGCTATAAGGCTTTATTTGGACTTGCTGT
CATTTTTACTATCGTTTCAAGTACGATTACTGTTATTGGACCTGACCGGCTGAAAGAGATGACAGATACCATGACCAAAG
GGCTGGCAGGAAAAATTGATTTAGATAAAATCGGTGAGATTGCTCTAACCTTGGCTCTCTTATACTTTGCTGGTGCTTTG
GTTTCTTATACTGCTAGCTTTATTGTGTCCACTTTGATTCAAAAGTTTTCGCAACGTCTGCGCAATGCCATTGCAGATAA
AATCAATAAGGTACCGCTCAAATATTTTGACAGCCATTCACAAGGAGATACCTTGTCTCGAGTGACCAATGATGTGGATT
TAATGACACAGTCTTTCAACCAAAGTTTAGTTTCAATGGTAGCAGCTATAATTCTCCTGATTGGCTCTATTTTCATGATG
ATTAAAACCAATGGAGCTCTTGCAGCGACCGCTATTTTGTCTGTTTTTGCTGGTTTTGTGTTATCCACTGTTATCATGGC
CAAGAGCCAGCCGCTTTTTAAAAAGCAACAAGCTAATCTAGCCGATGTCAGCGGTTATGTTGAAGAGGTCTATTCAGGTC
ATAATGTGGTTTCTAGTTACAATGCGATTCAGCAAAGCAAGAAGCAGTTTGAAAACTTGAATGACCAATTATTTGCAAGT
ATGTGGAAATCACAATTCTTTTCTGGAATTATGATGCCCCTTATGCAATTCATCGGAAATTTTGGGTATGTCATGGTCTG
TATTGTCGGTGCTACCATGGCTATTAACGGCGATATTACTATGGGAACGATTGTTGCCTTTATGACTTACGTCCGTATTT
TTACTCAGCCCATTGCGCAGATTGCTCAAGGAATCACTCAATTGCAATCAGCTAATGCTGCTATGGGACGTGTCTTTGAA
TTTCTTGATGAGGAAGAAATAGAAGACGAAAACCATAAAGTTAAACAACTTGAAAAAGTTGAAGGAAATGTTAATTTTGA
CAATGTTTTCTTTGGTTATAGTCCTGATAAAACTATTATTCATGATTTCTCGGCTCATGCTAAGGCTGGTCAAAAAATTG
CTATTGTGGGACCGACTGGTGCGGGTAAGACAACGATTGTTAACTTACTTATGCGTTTCTATGAGGTTGATAGAGGGATG
ATTTCTATTGATGGAGTTAATATCCATGATATGACACGAAAAGAAGTGCATGATGCTTTTGCCATGGTACTCCAAGATAC
TTGGCTCTTTGAAGGTACAGTTAAGGAAAATCTGATTTATAATCAAAAACATATCACTGATGAGCAAGTGATTGCAGCAG
CTAAGGCAGTTGGTGTTCATCATTTCATCAAGACTTTACCTAAGGGTTATGATACTGTTTTAGATGATTCGGTCACCTTA
TCAGTCGGTCAAAAACAACTCTTGACCATTGCACGTGCTCTTCTTAAAGATGCACCGCTTCTGATTCTTGATGAAGCAAC
TTCCTCTGTTGATACTCGTACGGAAGAACTTATTCAAAGGGCTATGGATCATTTGATGGAGGGGCGGACATCATTCGTTA
TTGCCCATCGTCTGTCAACTATTCGCAATGCTGATCTTATTCTTGTCATGAGAGATGGTAATATTATTGAACAAGGCAGC
CATGACCAATTGATGGCAGAAAATGGCTTCTATGCCGATCTCTATAATAGTCAATTTACAGAAGAAGTGGCTTGA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(361-508)

ABC transporter transmembrane region (ABC_membrane)

(24-297)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q8DUK4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

100

100

1