Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | AS52_RS21950 | Genome accession | NZ_CP010586 |
| Coordinates | 4354793..4355845 (-) | Length | 350 a.a. |
| NCBI ID | WP_028411611.1 | Uniprot ID | - |
| Organism | Priestia megaterium Q3 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 4349793..4360845
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AS52_RS21910 (AS52_04527) | - | 4350809..4351633 (+) | 825 | WP_033579701.1 | YqhG family protein | - |
| AS52_RS21915 (AS52_04528) | - | 4351657..4351842 (-) | 186 | WP_013059170.1 | YqzE family protein | - |
| AS52_RS21920 (AS52_04529) | comGG | 4351886..4352260 (-) | 375 | WP_033579700.1 | competence type IV pilus minor pilin ComGG | - |
| AS52_RS21925 (AS52_04530) | comGF | 4352250..4352687 (-) | 438 | WP_033579699.1 | competence type IV pilus minor pilin ComGF | - |
| AS52_RS21930 (AS52_04531) | - | 4352684..4353022 (-) | 339 | WP_049166199.1 | type II secretion system protein | - |
| AS52_RS21935 (AS52_04532) | comGD | 4353006..4353443 (-) | 438 | WP_033579697.1 | competence type IV pilus minor pilin ComGD | - |
| AS52_RS21940 (AS52_04533) | comGC | 4353430..4353741 (-) | 312 | WP_049166200.1 | competence type IV pilus major pilin ComGC | - |
| AS52_RS21945 (AS52_04534) | comGB | 4353756..4354802 (-) | 1047 | WP_033579696.1 | competence type IV pilus assembly protein ComGB | - |
| AS52_RS21950 (AS52_04535) | comGA | 4354793..4355845 (-) | 1053 | WP_028411611.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| AS52_RS21955 (AS52_04536) | - | 4356116..4356499 (-) | 384 | WP_028411612.1 | Spx/MgsR family RNA polymerase-binding regulatory protein | - |
| AS52_RS21960 (AS52_04537) | - | 4356761..4356997 (+) | 237 | WP_013059179.1 | DUF2626 domain-containing protein | - |
| AS52_RS21965 (AS52_04538) | - | 4357035..4357667 (-) | 633 | WP_028411613.1 | MBL fold metallo-hydrolase | - |
| AS52_RS27010 (AS52_04539) | - | 4357877..4358053 (+) | 177 | WP_028411614.1 | DUF2759 domain-containing protein | - |
| AS52_RS21975 (AS52_04540) | - | 4358089..4358991 (-) | 903 | WP_028411615.1 | M14 family metallocarboxypeptidase | - |
| AS52_RS21980 (AS52_04541) | - | 4359103..4360071 (-) | 969 | WP_013059183.1 | ROK family glucokinase | - |
| AS52_RS21985 (AS52_04542) | - | 4360074..4360280 (-) | 207 | WP_028411617.1 | YqgQ family protein | - |
Sequence
Protein
Download Length: 350 a.a. Molecular weight: 39596.97 Da Isoelectric Point: 9.0586
>NTDB_id=139446 AS52_RS21950 WP_028411611.1 4354793..4355845(-) (comGA) [Priestia megaterium Q3]
MTEIEQFATYVIRDACECRSSDVHIVPRKKDAVIQLRIDQELILKRVISKEMSERLISHFKFLGGMDIGERRKPQNGALT
TSVDHYQVNLRLSTLPTSHDESLVIRLLPHQQSTSLKHLSLFPEHTKKLISLLKFSHGLIIFTGPTGSGKTTTLYTLLHE
VKHLFNRNVITLEDPIEKPSETVLQVQVNERAGITYTTGLKAILRHDPDIIMVGEIRDSETAKIAVRAALTGHLVLTTMH
TKDTKGSLYRLLEFGVSFQEMEQTLVAVAAQRLVEIRCPLCSGKCHPACKKMRKHRQSSIYELLYGKELSAVMREVKGEN
ADYDYKTLRDVILKGIALGYLYPHSLDGWG
MTEIEQFATYVIRDACECRSSDVHIVPRKKDAVIQLRIDQELILKRVISKEMSERLISHFKFLGGMDIGERRKPQNGALT
TSVDHYQVNLRLSTLPTSHDESLVIRLLPHQQSTSLKHLSLFPEHTKKLISLLKFSHGLIIFTGPTGSGKTTTLYTLLHE
VKHLFNRNVITLEDPIEKPSETVLQVQVNERAGITYTTGLKAILRHDPDIIMVGEIRDSETAKIAVRAALTGHLVLTTMH
TKDTKGSLYRLLEFGVSFQEMEQTLVAVAAQRLVEIRCPLCSGKCHPACKKMRKHRQSSIYELLYGKELSAVMREVKGEN
ADYDYKTLRDVILKGIALGYLYPHSLDGWG
Nucleotide
Download Length: 1053 bp
>NTDB_id=139446 AS52_RS21950 WP_028411611.1 4354793..4355845(-) (comGA) [Priestia megaterium Q3]
TTGACCGAAATTGAACAGTTTGCTACTTACGTTATACGAGATGCATGTGAGTGTCGAAGTTCTGATGTGCATATTGTGCC
CCGAAAGAAAGATGCTGTGATTCAGCTGCGAATTGACCAGGAGCTTATTTTAAAGAGGGTTATTTCAAAGGAAATGTCTG
AACGGCTCATTTCGCATTTTAAATTTTTAGGGGGAATGGATATTGGGGAGCGCAGAAAACCTCAAAATGGTGCATTGACC
ACTTCCGTTGATCACTATCAAGTAAATTTGCGTTTATCAACTCTTCCTACTTCTCATGATGAAAGTCTTGTTATTCGGCT
TTTGCCTCATCAACAATCTACCTCTCTCAAACATTTATCTCTTTTTCCTGAACATACTAAAAAGCTTATTTCTCTCTTGA
AATTCTCTCATGGATTAATTATTTTTACCGGTCCTACAGGATCAGGTAAAACCACTACTCTATATACTCTTTTACACGAA
GTAAAGCACCTTTTTAATCGAAATGTTATTACACTAGAAGATCCTATTGAAAAACCGAGTGAAACCGTGCTTCAAGTGCA
GGTAAATGAACGCGCAGGGATTACGTATACGACTGGTTTAAAAGCTATATTGCGCCATGATCCAGACATTATCATGGTGG
GAGAAATAAGAGATAGTGAGACCGCCAAAATTGCTGTGAGAGCAGCGCTTACCGGACACTTGGTTTTGACAACGATGCAT
ACTAAAGATACAAAAGGATCTTTGTACAGGCTGCTTGAGTTTGGCGTTAGCTTTCAAGAAATGGAGCAGACTCTTGTAGC
AGTAGCTGCACAGCGTCTTGTAGAAATTCGCTGTCCGCTGTGTTCGGGAAAATGCCACCCTGCTTGTAAAAAAATGAGGA
AGCATCGTCAGTCCAGCATATACGAATTGCTTTATGGCAAGGAGCTTAGCGCAGTGATGAGAGAAGTGAAAGGAGAAAAT
GCGGATTATGATTATAAGACGCTCCGAGATGTTATTCTAAAAGGAATTGCGCTAGGCTATTTATATCCGCATTCGCTAGA
CGGATGGGGGTAA
TTGACCGAAATTGAACAGTTTGCTACTTACGTTATACGAGATGCATGTGAGTGTCGAAGTTCTGATGTGCATATTGTGCC
CCGAAAGAAAGATGCTGTGATTCAGCTGCGAATTGACCAGGAGCTTATTTTAAAGAGGGTTATTTCAAAGGAAATGTCTG
AACGGCTCATTTCGCATTTTAAATTTTTAGGGGGAATGGATATTGGGGAGCGCAGAAAACCTCAAAATGGTGCATTGACC
ACTTCCGTTGATCACTATCAAGTAAATTTGCGTTTATCAACTCTTCCTACTTCTCATGATGAAAGTCTTGTTATTCGGCT
TTTGCCTCATCAACAATCTACCTCTCTCAAACATTTATCTCTTTTTCCTGAACATACTAAAAAGCTTATTTCTCTCTTGA
AATTCTCTCATGGATTAATTATTTTTACCGGTCCTACAGGATCAGGTAAAACCACTACTCTATATACTCTTTTACACGAA
GTAAAGCACCTTTTTAATCGAAATGTTATTACACTAGAAGATCCTATTGAAAAACCGAGTGAAACCGTGCTTCAAGTGCA
GGTAAATGAACGCGCAGGGATTACGTATACGACTGGTTTAAAAGCTATATTGCGCCATGATCCAGACATTATCATGGTGG
GAGAAATAAGAGATAGTGAGACCGCCAAAATTGCTGTGAGAGCAGCGCTTACCGGACACTTGGTTTTGACAACGATGCAT
ACTAAAGATACAAAAGGATCTTTGTACAGGCTGCTTGAGTTTGGCGTTAGCTTTCAAGAAATGGAGCAGACTCTTGTAGC
AGTAGCTGCACAGCGTCTTGTAGAAATTCGCTGTCCGCTGTGTTCGGGAAAATGCCACCCTGCTTGTAAAAAAATGAGGA
AGCATCGTCAGTCCAGCATATACGAATTGCTTTATGGCAAGGAGCTTAGCGCAGTGATGAGAGAAGTGAAAGGAGAAAAT
GCGGATTATGATTATAAGACGCTCCGAGATGTTATTCTAAAAGGAATTGCGCTAGGCTATTTATATCCGCATTCGCTAGA
CGGATGGGGGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
58.571 |
100 |
0.586 |