Detailed information NTG0139388

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: SD98_RS29205
• Genome accession: NZ_CP010577
• Coordinates: 5644867..5645994 (+)
• Length: 375 a.a.
• NCBI ID: WP_000470754.1
• Uniprot ID: A0A9W3P6A6
• Organism: Bacillus thuringiensis serovar morrisoni strain BGSC 4AA1
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 5639867..5650994

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SD98_RS29175 (SD98_29240)	spoIIIJ	5639907..5640674 (-)	768	WP_000727741.1	YidC family membrane integrase SpoIIIJ	-
SD98_RS29180 (SD98_29245)	rnpA	5640727..5641074 (-)	348	WP_000726621.1	ribonuclease P protein component	-
SD98_RS29185 (SD98_29250)	rpmH	5641151..5641285 (-)	135	WP_000831901.1	50S ribosomal protein L34	-
SD98_RS29190 (SD98_29255)	dnaA	5641850..5643190 (+)	1341	WP_000428018.1	chromosomal replication initiator protein DnaA	-
SD98_RS29195 (SD98_29260)	dnaN	5643369..5644514 (+)	1146	WP_001212884.1	DNA polymerase III subunit beta	-
SD98_RS29200 (SD98_29265)	yaaA	5644642..5644854 (+)	213	WP_000680510.1	S4 domain-containing protein YaaA	-
SD98_RS29205 (SD98_29270)	recF	5644867..5645994 (+)	1128	WP_000470754.1	DNA replication/repair protein RecF	Machinery gene
SD98_RS29210 (SD98_29275)	gyrB	5646034..5647956 (+)	1923	WP_000435979.1	DNA topoisomerase (ATP-hydrolyzing) subunit B	-
SD98_RS29215 (SD98_29280)	gyrA	5648045..5650516 (+)	2472	WP_001282868.1	DNA gyrase subunit A	-

Sequence

Protein

• Length: 375 a.a.
• Molecular weight: 43318.66 Da
• Isoelectric Point: 6.7809

>NTDB_id=139388 SD98_RS29205 WP_000470754.1 5644867..5645994(+) (recF) [Bacillus thuringiensis serovar morrisoni strain BGSC 4AA1]
MFISEIQLKNYRNYEKLELSFEDKVNVIIGENAQGKTNLMEAIYVLAMAKSHRTSNDRELIRWDEEFGQIKGKLQKRNSS
LSLELNISKKGKKAKLNQLEQQKLSQYIGVMNVVMFAPEDLNLVKGSPQVRRRFLDMELGQIAPIYLYELSQYQKVLTQR
NHLLKKMQGNSKNEETMLDVFTLQLIEHGAKILQKRFEFLHLLQEWAAPIHRGISRGLEELEIVYKPSVDVSESMDLSKI
KEVYYESFQSVKQREIFRGTTLIGPHRDDLQFFVNSKNVQVFGSQGQQRTTALSLKLAEIELIYSEVKEYPILLLDDVLS
ELDDYRQSHLLNTIQGKVQTFVTTTSVDGIEHETLKDAKTIHVTNGTVDCEIDRA

Nucleotide

• Length: 1128 bp

>NTDB_id=139388 SD98_RS29205 WP_000470754.1 5644867..5645994(+) (recF) [Bacillus thuringiensis serovar morrisoni strain BGSC 4AA1]
TTGTTTATTTCAGAAATACAATTAAAAAACTATCGCAATTATGAAAAATTAGAGCTTTCCTTTGAAGATAAGGTAAATGT
AATTATCGGCGAAAATGCACAAGGGAAAACAAACTTGATGGAAGCTATTTATGTTTTAGCGATGGCGAAATCTCATAGAA
CCTCTAATGATCGCGAACTTATCCGCTGGGATGAAGAGTTTGGTCAAATAAAAGGGAAATTACAAAAAAGAAACAGTTCT
TTGTCTTTGGAATTAAATATTTCGAAAAAAGGTAAAAAGGCAAAATTAAATCAACTTGAACAACAAAAGTTAAGTCAATA
TATTGGCGTGATGAACGTTGTCATGTTTGCCCCAGAAGATTTAAATCTTGTAAAAGGAAGCCCTCAAGTAAGAAGACGCT
TTTTAGATATGGAATTAGGACAAATAGCTCCTATATATTTGTATGAATTAAGTCAATATCAAAAGGTGCTCACGCAACGA
AATCACTTGTTGAAAAAAATGCAAGGGAATAGTAAGAATGAGGAAACGATGTTGGATGTATTTACACTTCAACTAATTGA
GCATGGTGCGAAAATACTGCAAAAACGTTTTGAATTTTTGCATTTGCTACAGGAATGGGCAGCTCCAATTCATCGCGGTA
TAAGCCGTGGATTAGAAGAGTTAGAAATTGTCTATAAACCAAGTGTAGATGTATCAGAATCAATGGATTTGTCGAAAATA
AAAGAAGTATACTATGAAAGTTTTCAATCTGTGAAACAACGTGAAATTTTCCGTGGTACGACTTTAATTGGTCCTCATCG
TGATGATTTACAATTCTTCGTTAATAGTAAAAATGTTCAAGTCTTTGGTTCGCAAGGGCAACAACGAACGACCGCACTAT
CCCTAAAATTAGCTGAAATTGAATTAATTTATTCAGAGGTTAAAGAATATCCAATCCTTTTGCTGGATGATGTTTTATCA
GAATTAGACGATTATCGTCAATCACATCTGTTAAATACAATTCAAGGAAAGGTGCAAACATTTGTTACAACGACGAGTGT
CGACGGAATTGAACACGAAACATTAAAAGATGCGAAAACAATTCATGTAACGAACGGCACGGTAGATTGTGAAATAGATA
GGGCATAA

Domains

Predicted by InterproScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (2-348)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Bacillus subtilis subsp. subtilis str. 168	66.033	98.133	0.648