Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   SB45_RS19945 Genome accession   NZ_CP010556
Coordinates   326316..326480 (+) Length   54 a.a.
NCBI ID   WP_269465305.1    Uniprot ID   -
Organism   Bacillus velezensis strain L-H15     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 321316..331480
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SB45_RS19940 srfAB 323207..326299 (+) 3093 Protein_299 surfactin non-ribosomal peptide synthetase SrfAB -
  SB45_RS19945 comS 326316..326480 (+) 165 WP_269465305.1 competence protein ComS Regulator

Sequence

Protein


Download         Length: 54 a.a.        Molecular weight: 6264.26 Da        Isoelectric Point: 11.7559

>NTDB_id=139299 SB45_RS19945 WP_269465305.1 326316..326480(+) (comS) [Bacillus velezensis strain L-H15]
MRPRRNSSLNRSDKRLIRSIILFPQHSAGCISLISSDRPARATTSLLYFCWKDQ

Nucleotide


Download         Length: 165 bp        

>NTDB_id=139299 SB45_RS19945 WP_269465305.1 326316..326480(+) (comS) [Bacillus velezensis strain L-H15]
ATGAGACCGAGGAGGAACAGCAGTTTGAACCGATCCGACAAGCGCCTTATCAGAAGCATTATCCTGTTTCCTCAGCACAG
CGCAGGATGTATATCCTTAATCAGCTCGGACAGGCCAGCACGAGCTACAACGTCCCTGCTGTACTTCTGCTGGAAGGATC
AGTAG

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(9-52)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

58.696

85.185

0.5

Multiple sequence alignment