Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   PG1C_RS13220 Genome accession   NZ_CP010554
Coordinates   2671883..2672278 (-) Length   131 a.a.
NCBI ID   WP_202635200.1    Uniprot ID   A0A0C5JBA5
Organism   Rugosibacter aromaticivorans strain Ca6     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2666883..2677278
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PG1C_RS13205 (PG1C_12995) - 2668943..2670940 (-) 1998 WP_202635198.1 methyl-accepting chemotaxis protein -
  PG1C_RS13210 (PG1C_13000) - 2670971..2671510 (-) 540 WP_202635199.1 chemotaxis protein CheW -
  PG1C_RS13215 (PG1C_13005) - 2671503..2671886 (-) 384 WP_269464906.1 response regulator -
  PG1C_RS13220 (PG1C_13010) pilG 2671883..2672278 (-) 396 WP_202635200.1 response regulator Regulator
  PG1C_RS13225 (PG1C_13015) - 2672361..2672546 (-) 186 WP_202635201.1 rubredoxin -
  PG1C_RS13230 (PG1C_13020) thiD 2672716..2673594 (+) 879 WP_202635202.1 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase -
  PG1C_RS13235 (PG1C_13025) thiE 2673607..2674314 (+) 708 WP_202635203.1 thiamine phosphate synthase -
  PG1C_RS13240 (PG1C_13030) hemL 2674304..2675587 (+) 1284 WP_202635204.1 glutamate-1-semialdehyde 2,1-aminomutase -
  PG1C_RS13245 (PG1C_13035) corA 2675717..2677075 (-) 1359 WP_202635205.1 magnesium/cobalt transporter CorA -

Sequence

Protein


Download         Length: 131 a.a.        Molecular weight: 14302.46 Da        Isoelectric Point: 5.8140

>NTDB_id=139186 PG1C_RS13220 WP_202635200.1 2671883..2672278(-) (pilG) [Rugosibacter aromaticivorans strain Ca6]
MTTQSVLSGITVMVIDDSNTIRKTAETFLAQAGAHVVLADDGFDALAKINDYRPAVIFCDIMMPRLDGYQTCTLIKKNSL
FAATPVVMLSSRDGLFDRARGQAAGSNEYLTKPFTKDNLLNAVALQIRENL

Nucleotide


Download         Length: 396 bp        

>NTDB_id=139186 PG1C_RS13220 WP_202635200.1 2671883..2672278(-) (pilG) [Rugosibacter aromaticivorans strain Ca6]
ATGACAACGCAATCAGTGCTTTCCGGCATCACCGTCATGGTGATTGATGACTCGAATACCATTCGTAAAACTGCGGAGAC
TTTTCTTGCGCAAGCGGGTGCTCATGTGGTGCTGGCAGATGATGGTTTTGATGCGCTGGCGAAGATCAATGATTATCGAC
CAGCGGTTATTTTCTGCGACATTATGATGCCGCGTTTGGATGGCTATCAAACGTGCACGCTGATCAAGAAAAATTCACTT
TTTGCTGCTACGCCAGTAGTTATGCTGTCCTCGCGCGATGGGTTGTTTGATCGTGCCCGTGGCCAGGCGGCGGGGTCCAA
TGAGTATTTAACCAAACCTTTTACTAAAGATAATCTGCTCAATGCAGTTGCCCTGCAGATCAGGGAAAATCTATGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(12-123)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0C5JBA5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

59.167

91.603

0.542

Multiple sequence alignment