Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | PG1C_RS01690 | Genome accession | NZ_CP010554 |
| Coordinates | 321320..322405 (-) | Length | 361 a.a. |
| NCBI ID | WP_202635721.1 | Uniprot ID | A0A0C5JJM3 |
| Organism | Rugosibacter aromaticivorans strain Ca6 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 316320..327405
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PG1C_RS01665 (PG1C_01635) | ftsX | 316701..317600 (-) | 900 | WP_202635716.1 | permease-like cell division protein FtsX | - |
| PG1C_RS01670 (PG1C_01640) | - | 317608..318255 (-) | 648 | WP_202635717.1 | cell division ATP-binding protein FtsE | - |
| PG1C_RS01675 (PG1C_01645) | - | 318491..319732 (-) | 1242 | WP_202635718.1 | polyhydroxyalkanoate depolymerase | - |
| PG1C_RS01680 (PG1C_01650) | - | 319948..320610 (+) | 663 | WP_202635719.1 | glutathione S-transferase | - |
| PG1C_RS01685 (PG1C_01655) | - | 320901..321248 (+) | 348 | WP_202635720.1 | cupin domain-containing protein | - |
| PG1C_RS01690 (PG1C_01660) | pilA | 321320..322405 (-) | 1086 | WP_202635721.1 | signal recognition particle-docking protein FtsY | Machinery gene |
| PG1C_RS01695 (PG1C_01665) | - | 322514..323899 (+) | 1386 | WP_202635722.1 | M16 family metallopeptidase | - |
| PG1C_RS01700 (PG1C_01670) | - | 323944..325254 (+) | 1311 | WP_237218247.1 | M16 family metallopeptidase | - |
| PG1C_RS01705 (PG1C_01675) | rsmD | 325270..325803 (+) | 534 | WP_202635723.1 | 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD | - |
| PG1C_RS01710 (PG1C_01680) | coaD | 325800..326309 (+) | 510 | WP_202635724.1 | pantetheine-phosphate adenylyltransferase | - |
| PG1C_RS01715 (PG1C_01685) | - | 326322..326570 (+) | 249 | WP_202635725.1 | YfhL family 4Fe-4S dicluster ferredoxin | - |
| PG1C_RS01720 (PG1C_01690) | mutM | 326578..327402 (-) | 825 | WP_202635726.1 | bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase | - |
Sequence
Protein
Download Length: 361 a.a. Molecular weight: 37994.48 Da Isoelectric Point: 7.9317
>NTDB_id=139175 PG1C_RS01690 WP_202635721.1 321320..322405(-) (pilA) [Rugosibacter aromaticivorans strain Ca6]
MFSFLKKKDAPSSRNVPGESAASNAPNTSSAHEAAAAVAPTATPAGPQAASASTSWRDRLKAGLSRTRAALTTPLGELFS
RSRIDEALLDDLETTLLTADCGVDATQWLLDELKLTVKKNKLDSPSQLRQVLADRLMTLLAPLEQPLDVTAHKPFIVMIA
GVNGAGKTTSIGKLAKHLQSQGKSVLLAAGDTFRAAAREQLKAWGERNGVAVIAQESGDPAAVVFDAISAARARNIDVVL
ADTAGRLPTQLHLMEEIAKVRRVIQKIDATGPHEVLLVLDASIGQNAVQQVKAFDQSIQVTGLVLTKLDGTAKGGVLAAI
ARQCPKPVRFIGVGEGIDDLQPFRAGEFVEALLTGPENTAA
MFSFLKKKDAPSSRNVPGESAASNAPNTSSAHEAAAAVAPTATPAGPQAASASTSWRDRLKAGLSRTRAALTTPLGELFS
RSRIDEALLDDLETTLLTADCGVDATQWLLDELKLTVKKNKLDSPSQLRQVLADRLMTLLAPLEQPLDVTAHKPFIVMIA
GVNGAGKTTSIGKLAKHLQSQGKSVLLAAGDTFRAAAREQLKAWGERNGVAVIAQESGDPAAVVFDAISAARARNIDVVL
ADTAGRLPTQLHLMEEIAKVRRVIQKIDATGPHEVLLVLDASIGQNAVQQVKAFDQSIQVTGLVLTKLDGTAKGGVLAAI
ARQCPKPVRFIGVGEGIDDLQPFRAGEFVEALLTGPENTAA
Nucleotide
Download Length: 1086 bp
>NTDB_id=139175 PG1C_RS01690 WP_202635721.1 321320..322405(-) (pilA) [Rugosibacter aromaticivorans strain Ca6]
ATGTTTAGTTTCCTCAAAAAAAAGGATGCGCCCTCCTCACGGAATGTGCCGGGCGAGTCCGCTGCATCGAACGCCCCGAA
CACATCAAGTGCCCACGAAGCAGCAGCTGCTGTCGCGCCCACGGCGACACCGGCTGGTCCACAGGCAGCGTCTGCGTCCA
CCTCATGGCGTGATCGGCTCAAGGCGGGCCTCTCGCGCACACGCGCAGCACTCACCACGCCGCTGGGAGAGTTGTTCAGC
CGTAGCCGAATTGACGAGGCGCTGCTGGATGATCTTGAAACCACCTTACTCACCGCCGATTGTGGCGTCGACGCGACGCA
GTGGTTGCTGGATGAACTCAAATTAACCGTCAAGAAAAACAAGCTCGACAGCCCGTCACAACTGCGGCAAGTACTGGCCG
ACCGGCTGATGACGCTGCTCGCGCCACTGGAACAGCCACTGGATGTGACTGCCCACAAGCCCTTCATCGTGATGATTGCC
GGTGTGAACGGCGCGGGAAAAACCACCTCCATCGGTAAATTGGCGAAACACTTGCAGAGCCAAGGCAAGAGCGTATTACT
GGCCGCAGGCGACACCTTTCGCGCGGCAGCGCGTGAGCAGCTCAAAGCCTGGGGCGAACGCAACGGCGTTGCCGTCATCG
CGCAAGAATCGGGAGACCCGGCCGCCGTTGTGTTCGACGCGATCAGCGCCGCACGCGCGCGCAATATCGATGTCGTCTTG
GCCGATACCGCTGGCCGCCTGCCCACACAATTACATCTGATGGAAGAAATTGCCAAGGTGCGACGCGTCATTCAAAAAAT
CGACGCCACCGGCCCGCATGAAGTATTACTGGTGCTGGATGCCAGCATCGGCCAAAACGCTGTGCAACAGGTCAAAGCGT
TCGATCAATCCATTCAGGTCACCGGCCTCGTTCTCACCAAACTTGACGGTACCGCCAAGGGCGGCGTGCTGGCCGCCATC
GCCCGGCAATGCCCCAAGCCTGTACGCTTCATTGGCGTAGGCGAAGGTATTGATGATTTGCAGCCGTTCCGGGCGGGTGA
GTTTGTCGAGGCGCTACTGACGGGACCGGAAAATACCGCCGCGTAA
ATGTTTAGTTTCCTCAAAAAAAAGGATGCGCCCTCCTCACGGAATGTGCCGGGCGAGTCCGCTGCATCGAACGCCCCGAA
CACATCAAGTGCCCACGAAGCAGCAGCTGCTGTCGCGCCCACGGCGACACCGGCTGGTCCACAGGCAGCGTCTGCGTCCA
CCTCATGGCGTGATCGGCTCAAGGCGGGCCTCTCGCGCACACGCGCAGCACTCACCACGCCGCTGGGAGAGTTGTTCAGC
CGTAGCCGAATTGACGAGGCGCTGCTGGATGATCTTGAAACCACCTTACTCACCGCCGATTGTGGCGTCGACGCGACGCA
GTGGTTGCTGGATGAACTCAAATTAACCGTCAAGAAAAACAAGCTCGACAGCCCGTCACAACTGCGGCAAGTACTGGCCG
ACCGGCTGATGACGCTGCTCGCGCCACTGGAACAGCCACTGGATGTGACTGCCCACAAGCCCTTCATCGTGATGATTGCC
GGTGTGAACGGCGCGGGAAAAACCACCTCCATCGGTAAATTGGCGAAACACTTGCAGAGCCAAGGCAAGAGCGTATTACT
GGCCGCAGGCGACACCTTTCGCGCGGCAGCGCGTGAGCAGCTCAAAGCCTGGGGCGAACGCAACGGCGTTGCCGTCATCG
CGCAAGAATCGGGAGACCCGGCCGCCGTTGTGTTCGACGCGATCAGCGCCGCACGCGCGCGCAATATCGATGTCGTCTTG
GCCGATACCGCTGGCCGCCTGCCCACACAATTACATCTGATGGAAGAAATTGCCAAGGTGCGACGCGTCATTCAAAAAAT
CGACGCCACCGGCCCGCATGAAGTATTACTGGTGCTGGATGCCAGCATCGGCCAAAACGCTGTGCAACAGGTCAAAGCGT
TCGATCAATCCATTCAGGTCACCGGCCTCGTTCTCACCAAACTTGACGGTACCGCCAAGGGCGGCGTGCTGGCCGCCATC
GCCCGGCAATGCCCCAAGCCTGTACGCTTCATTGGCGTAGGCGAAGGTATTGATGATTTGCAGCCGTTCCGGGCGGGTGA
GTTTGTCGAGGCGCTACTGACGGGACCGGAAAATACCGCCGCGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Neisseria gonorrhoeae MS11 |
56.812 |
95.568 |
0.543 |