Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   SA40TW_RS03355 Genome accession   NZ_CP013182
Coordinates   685855..686529 (+) Length   224 a.a.
NCBI ID   WP_001166497.1    Uniprot ID   -
Organism   Staphylococcus aureus strain SA40TW     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 680855..691529
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SA40TW_RS03325 (SA40TW_03185) - 681071..682138 (+) 1068 WP_000980139.1 membrane protein -
  SA40TW_RS03330 (SA40TW_03190) - 682289..683332 (+) 1044 WP_001030774.1 alpha/beta hydrolase -
  SA40TW_RS03340 (SA40TW_03200) - 683660..684088 (+) 429 WP_000198505.1 hypothetical protein -
  SA40TW_RS03345 (SA40TW_03205) - 684297..684803 (-) 507 WP_000940129.1 GNAT family N-acetyltransferase -
  SA40TW_RS03350 (SA40TW_03210) graX 684916..685839 (+) 924 WP_021758225.1 auxiliary protein GraX/ApsX -
  SA40TW_RS03355 (SA40TW_03215) braR 685855..686529 (+) 675 WP_001166497.1 response regulator transcription factor GraR/ApsR Regulator
  SA40TW_RS03360 (SA40TW_03220) graS 686522..687562 (+) 1041 WP_001061260.1 histidine kinase GraS/ApsS -
  SA40TW_RS03365 (SA40TW_03225) vraF 687706..688467 (+) 762 WP_000985996.1 ABC transporter ATP-binding protein VraF -
  SA40TW_RS03370 (SA40TW_03230) vraG 688457..690346 (+) 1890 WP_000143626.1 ABC transporter permease VraG -

Sequence

Protein


Download         Length: 224 a.a.        Molecular weight: 26106.97 Da        Isoelectric Point: 4.3968

>NTDB_id=139102 SA40TW_RS03355 WP_001166497.1 685855..686529(+) (braR) [Staphylococcus aureus strain SA40TW]
MQILLVEDDNTLFQELKKELEQWDFNVAGIEDFGKVMDTFESFNPEIVILDVQLPKYDGFYWCRKMREVSNVPILFLSSR
DNPMDQVMSMELGADDYMQKPFYTNVLIAKLQAIYRRVYEFTAEEKRTLTWQDAIIDLSKDSIQKGDQTIFLSKTEMIIL
EILITKKNQIVSRDTIITALWDDEAFVSDNTLTVNVNRLRKKLSEISMDSAIETKVGKGYMAHE

Nucleotide


Download         Length: 675 bp        

>NTDB_id=139102 SA40TW_RS03355 WP_001166497.1 685855..686529(+) (braR) [Staphylococcus aureus strain SA40TW]
ATGCAAATACTACTAGTAGAAGATGACAATACTTTGTTTCAAGAATTGAAAAAAGAATTAGAACAATGGGATTTTAATGT
TGCTGGTATTGAAGATTTCGGCAAAGTAATGGATACATTTGAAAGTTTTAATCCTGAAATTGTTATATTGGATGTTCAAT
TACCTAAATATGATGGGTTTTATTGGTGCAGAAAAATGAGAGAAGTTTCCAACGTACCAATATTATTTTTATCATCTCGT
GATAATCCAATGGATCAAGTGATGAGTATGGAACTTGGCGCAGATGATTATATGCAAAAGCCTTTTTATACAAATGTATT
AATTGCTAAATTACAAGCGATTTATCGACGAGTGTATGAATTTACTGCTGAAGAAAAACGCACGTTAACATGGCAAGATG
CCATTATAGATCTATCAAAAGATAGTATACAAAAAGGTGATCAGACGATTTTCCTGTCTAAAACAGAAATGATTATATTA
GAAATTCTTATTACCAAAAAAAATCAAATCGTTTCGAGAGATACAATTATCACTGCATTATGGGATGATGAAGCATTTGT
TAGTGATAATACGTTAACAGTAAATGTGAATCGTTTACGAAAAAAATTATCTGAAATAAGTATGGATAGTGCAATCGAAA
CAAAAGTAGGAAAAGGATATATGGCTCATGAATAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(148-221)

Response regulator receiver domain (Response_reg)

(3-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

40.909

98.214

0.402