Detailed information    

insolico Bioinformatically predicted

Overview


Name   braS   Type   Regulator
Locus tag   RU53_RS14000 Genome accession   NZ_CP010526
Coordinates   2756206..2757093 (-) Length   295 a.a.
NCBI ID   WP_000143427.1    Uniprot ID   -
Organism   Staphylococcus aureus subsp. aureus ST772-MRSA-V strain DAR4145     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 2751206..2762093
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RU53_RS16035 - 2751234..2751317 (+) 84 WP_031797553.1 hypothetical protein -
  RU53_RS13970 (RU53_2683) - 2751425..2751922 (-) 498 WP_001065268.1 glutathione peroxidase -
  RU53_RS16040 - 2751932..2752192 (-) 261 WP_001789910.1 hypothetical protein -
  RU53_RS16050 - 2752574..2752687 (-) 114 WP_011447078.1 hypothetical protein -
  RU53_RS13990 (RU53_2684) - 2753346..2755346 (-) 2001 WP_000776738.1 ABC transporter permease -
  RU53_RS13995 (RU53_2685) - 2755343..2756098 (-) 756 WP_000923760.1 ABC transporter ATP-binding protein -
  RU53_RS14000 (RU53_2686) braS 2756206..2757093 (-) 888 WP_000143427.1 nisin susceptibility-associated two-component system sensor histidine kinase NsaS Regulator
  RU53_RS14005 (RU53_2687) braR 2757104..2757769 (-) 666 WP_000697877.1 nisin susceptibility-associated two-component system response regulator NsaR Regulator
  RU53_RS14010 (RU53_2688) - 2757795..2757995 (-) 201 WP_000604727.1 hypothetical protein -
  RU53_RS14020 (RU53_2689) - 2758193..2759617 (+) 1425 WP_000953748.1 alkaline phosphatase -
  RU53_RS16535 (RU53_2690) - 2759677..2759778 (-) 102 WP_000731976.1 SE2200 family small protein -
  RU53_RS14025 (RU53_2691) - 2759900..2760355 (-) 456 WP_000106185.1 MarR family winged helix-turn-helix transcriptional regulator -
  RU53_RS14030 (RU53_2692) - 2760600..2761361 (-) 762 WP_000323441.1 alpha/beta hydrolase -

Sequence


Protein


Download         Length: 295 a.a.        Molecular weight: 34058.35 Da        Isoelectric Point: 5.6439

>NTDB_id=139097 RU53_RS14000 WP_000143427.1 2756206..2757093(-) (braS) [Staphylococcus aureus subsp. aureus ST772-MRSA-V strain DAR4145]
MTFLKSITQEIAIVIVIFALFGLMFYLYHLPLEAYLLALGVILLLLLIFIGIKYLSFVKTISQQQQIENLETALYQLKNE
QIEYKNDVESYFLTWVHQMKTPITAAQLLLERDEPNVVNRVRQEVIQIDNYTSLALSYLKLLNETSDISVTKISINNIIR
PIIMKYSIQFIDQKTKIHYEPCHYEVLTDVRWTSLMIEQLINNALKYARGKDIWIEFDEQSNQLYVKDNGIGISEADLPK
IFDKGYSGYNGQRQSNSSGIGLFIVKQISTHTNHPVSVVSKQNEGTTFTIQFPDE

Nucleotide


Download         Length: 888 bp        

>NTDB_id=139097 RU53_RS14000 WP_000143427.1 2756206..2757093(-) (braS) [Staphylococcus aureus subsp. aureus ST772-MRSA-V strain DAR4145]
ATGACCTTTCTTAAAAGTATTACTCAGGAAATAGCAATAGTCATAGTTATTTTTGCTTTATTTGGCTTAATGTTTTACCT
GTATCATTTGCCATTAGAAGCATATTTACTAGCACTTGGCGTTATTTTATTATTATTACTCATATTCATAGGTATTAAAT
ATTTAAGTTTTGTAAAAACTATAAGCCAACAACAACAAATTGAAAACTTAGAAACTGCGTTGTATCAGCTTAAAAATGAA
CAAATTGAATATAAAAATGATGTAGAGAGCTACTTTTTAACATGGGTACATCAAATGAAAACACCCATTACTGCAGCACA
ACTGTTACTTGAAAGAGATGAGCCTAATGTTGTGAATCGTGTTCGTCAAGAGGTTATTCAAATTGATAACTATACAAGTT
TAGCACTTAGTTATTTAAAGTTATTAAATGAAACTTCTGATATTTCTGTCACTAAAATTTCGATTAATAATATCATTCGC
CCAATTATTATGAAATATTCAATACAGTTTATTGATCAAAAAACAAAAATCCATTATGAACCTTGTCATTACGAAGTATT
AACTGACGTTAGATGGACCTCTTTAATGATAGAACAATTAATAAATAATGCACTTAAGTATGCGAGAGGTAAAGATATAT
GGATTGAATTTGATGAGCAATCCAATCAATTATACGTAAAAGATAATGGTATCGGTATTAGTGAAGCGGACTTGCCTAAA
ATATTTGATAAGGGCTATTCAGGTTATAATGGCCAGCGTCAAAGTAACTCAAGTGGGATTGGCTTATTTATCGTAAAACA
AATTTCAACTCACACAAACCATCCTGTTTCAGTCGTATCTAAACAAAATGAGGGTACAACATTTACGATTCAATTTCCAG
ATGAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

99.322

100

0.993


Multiple sequence alignment