Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | RC46_RS04840 | Genome accession | NZ_CP010509 |
| Coordinates | 913950..914252 (+) | Length | 100 a.a. |
| NCBI ID | WP_002932767.1 | Uniprot ID | A0A5T1CZF9 |
| Organism | Campylobacter jejuni strain CJ677CC540 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 908950..919252
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RC46_RS04815 (RC46_04815) | rpsR | 909312..909572 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| RC46_RS04820 (RC46_04820) | lon | 909633..912008 (-) | 2376 | WP_002866098.1 | endopeptidase La | - |
| RC46_RS04825 (RC46_04825) | - | 912025..912672 (-) | 648 | WP_002877748.1 | outer membrane protein assembly factor BamD | - |
| RC46_RS04830 (RC46_04830) | fliW | 912833..913222 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| RC46_RS04835 (RC46_04835) | proC | 913222..913953 (+) | 732 | WP_002932769.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| RC46_RS04840 (RC46_04840) | ctsT | 913950..914252 (+) | 303 | WP_002932767.1 | transformation system protein | Machinery gene |
| RC46_RS04845 (RC46_04845) | - | 914249..914911 (+) | 663 | WP_002866103.1 | hypothetical protein | - |
| RC46_RS04850 (RC46_04850) | - | 914908..915360 (+) | 453 | WP_002869049.1 | hypothetical protein | - |
| RC46_RS04855 (RC46_04855) | hemD | 915357..915986 (-) | 630 | WP_002932761.1 | uroporphyrinogen-III synthase | - |
| RC46_RS04860 (RC46_04860) | thiE | 915964..916596 (-) | 633 | WP_002932757.1 | thiamine phosphate synthase | - |
| RC46_RS04865 (RC46_04865) | thiD | 916586..917398 (-) | 813 | WP_002869047.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| RC46_RS04870 (RC46_04870) | - | 917395..918081 (-) | 687 | WP_002932755.1 | 3-methyladenine DNA glycosylase | - |
| RC46_RS04875 (RC46_04875) | - | 918078..918839 (-) | 762 | WP_002856328.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12120.19 Da Isoelectric Point: 6.2957
>NTDB_id=138782 RC46_RS04840 WP_002932767.1 913950..914252(+) (ctsT) [Campylobacter jejuni strain CJ677CC540]
MKKAFILIESISAITIISLIFIGIFYYYAQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYAQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=138782 RC46_RS04840 WP_002932767.1 913950..914252(+) (ctsT) [Campylobacter jejuni strain CJ677CC540]
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATGCTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATGCTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |