Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | RC29_RS05470 | Genome accession | NZ_CP010508 |
| Coordinates | 1018026..1018328 (+) | Length | 100 a.a. |
| NCBI ID | WP_002932767.1 | Uniprot ID | A0A5T1CZF9 |
| Organism | Campylobacter jejuni strain CJ677CC523 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1013026..1023328
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RC29_RS05445 (RC29_05440) | rpsR | 1013388..1013648 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| RC29_RS05450 (RC29_05445) | lon | 1013709..1016084 (-) | 2376 | WP_002866098.1 | endopeptidase La | - |
| RC29_RS05455 (RC29_05450) | - | 1016101..1016748 (-) | 648 | WP_002877748.1 | outer membrane protein assembly factor BamD | - |
| RC29_RS05460 (RC29_05455) | fliW | 1016909..1017298 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| RC29_RS05465 (RC29_05460) | proC | 1017298..1018029 (+) | 732 | WP_002932769.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| RC29_RS05470 (RC29_05465) | ctsT | 1018026..1018328 (+) | 303 | WP_002932767.1 | transformation system protein | Machinery gene |
| RC29_RS05475 (RC29_05470) | - | 1018325..1018987 (+) | 663 | WP_002866103.1 | hypothetical protein | - |
| RC29_RS05480 (RC29_05475) | - | 1018984..1019436 (+) | 453 | WP_002869049.1 | hypothetical protein | - |
| RC29_RS05485 (RC29_05480) | hemD | 1019433..1020062 (-) | 630 | WP_002932761.1 | uroporphyrinogen-III synthase | - |
| RC29_RS05490 (RC29_05485) | thiE | 1020040..1020672 (-) | 633 | WP_002932757.1 | thiamine phosphate synthase | - |
| RC29_RS05495 (RC29_05490) | thiD | 1020662..1021474 (-) | 813 | WP_002869047.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| RC29_RS05500 (RC29_05495) | - | 1021471..1022157 (-) | 687 | WP_002932755.1 | 3-methyladenine DNA glycosylase | - |
| RC29_RS05505 (RC29_05500) | - | 1022154..1022915 (-) | 762 | WP_002932753.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12120.19 Da Isoelectric Point: 6.2957
>NTDB_id=138756 RC29_RS05470 WP_002932767.1 1018026..1018328(+) (ctsT) [Campylobacter jejuni strain CJ677CC523]
MKKAFILIESISAITIISLIFIGIFYYYAQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYAQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=138756 RC29_RS05470 WP_002932767.1 1018026..1018328(+) (ctsT) [Campylobacter jejuni strain CJ677CC523]
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATGCTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATGCTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |