Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | RC18_RS05140 | Genome accession | NZ_CP010507 |
| Coordinates | 968329..968631 (+) | Length | 100 a.a. |
| NCBI ID | WP_002932767.1 | Uniprot ID | A0A5T1CZF9 |
| Organism | Campylobacter jejuni strain CJ677CC078 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 963329..973631
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RC18_RS05115 (RC18_05115) | rpsR | 963691..963951 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| RC18_RS05120 (RC18_05120) | lon | 964012..966387 (-) | 2376 | WP_002866098.1 | endopeptidase La | - |
| RC18_RS05125 (RC18_05125) | - | 966404..967051 (-) | 648 | WP_002877748.1 | outer membrane protein assembly factor BamD | - |
| RC18_RS05130 (RC18_05130) | fliW | 967212..967601 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| RC18_RS05135 (RC18_05135) | proC | 967601..968332 (+) | 732 | WP_002932769.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| RC18_RS05140 (RC18_05140) | ctsT | 968329..968631 (+) | 303 | WP_002932767.1 | transformation system protein | Machinery gene |
| RC18_RS05145 (RC18_05145) | - | 968628..969290 (+) | 663 | WP_002866103.1 | hypothetical protein | - |
| RC18_RS05150 (RC18_05150) | - | 969287..969739 (+) | 453 | WP_002869049.1 | hypothetical protein | - |
| RC18_RS05155 (RC18_05155) | hemD | 969736..970365 (-) | 630 | WP_002932761.1 | uroporphyrinogen-III synthase | - |
| RC18_RS05160 (RC18_05160) | thiE | 970343..970975 (-) | 633 | WP_002932757.1 | thiamine phosphate synthase | - |
| RC18_RS05165 (RC18_05165) | thiD | 970965..971777 (-) | 813 | WP_002869047.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| RC18_RS05170 (RC18_05170) | - | 971774..972460 (-) | 687 | WP_002932755.1 | 3-methyladenine DNA glycosylase | - |
| RC18_RS05175 (RC18_05175) | - | 972457..973218 (-) | 762 | WP_002932753.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12120.19 Da Isoelectric Point: 6.2957
>NTDB_id=138729 RC18_RS05140 WP_002932767.1 968329..968631(+) (ctsT) [Campylobacter jejuni strain CJ677CC078]
MKKAFILIESISAITIISLIFIGIFYYYAQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYAQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=138729 RC18_RS05140 WP_002932767.1 968329..968631(+) (ctsT) [Campylobacter jejuni strain CJ677CC078]
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATGCTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATGCTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |