Detailed information NTG0138680

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ASE18_RS18785
• Genome accession: NZ_CP013112
• Coordinates: 3797803..3798828 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain YD786
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 3792803..3803828

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ASE18_RS18755 (ASE18_18755)	zapB	3792887..3793132 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
ASE18_RS18760 (ASE18_18760)	rraA	3793217..3793702 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
ASE18_RS18765 (ASE18_18765)	menA	3793795..3794721 (-)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ASE18_RS18770 (ASE18_18770)	hslU	3794788..3796119 (-)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
ASE18_RS18775 (ASE18_18775)	hslV	3796129..3796659 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
ASE18_RS18780 (ASE18_18780)	ftsN	3796752..3797711 (-)	960	WP_071885020.1	cell division protein FtsN	-
ASE18_RS18785 (ASE18_18785)	cytR	3797803..3798828 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
ASE18_RS18790 (ASE18_18790)	priA	3798984..3801182 (-)	2199	WP_001324365.1	primosomal protein N'	Machinery gene
ASE18_RS18795 (ASE18_18795)	rpmE	3801385..3801597 (+)	213	WP_000710769.1	50S ribosomal protein L31	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=138680 ASE18_RS18785 WP_000644904.1 3797803..3798828(-) (cytR) [Escherichia coli strain YD786]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=138680 ASE18_RS18785 WP_000644904.1 3797803..3798828(-) (cytR) [Escherichia coli strain YD786]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAACCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGCTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCACTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628