Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | RC11_RS04680 | Genome accession | NZ_CP010505 |
| Coordinates | 885316..885618 (+) | Length | 100 a.a. |
| NCBI ID | WP_002932767.1 | Uniprot ID | A0A5T1CZF9 |
| Organism | Campylobacter jejuni strain CJ677CC052 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 880316..890618
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RC11_RS04655 (RC11_04645) | rpsR | 880678..880938 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| RC11_RS04660 (RC11_04650) | lon | 880999..883374 (-) | 2376 | WP_002866098.1 | endopeptidase La | - |
| RC11_RS04665 (RC11_04655) | - | 883391..884038 (-) | 648 | WP_002877748.1 | outer membrane protein assembly factor BamD | - |
| RC11_RS04670 (RC11_04660) | fliW | 884199..884588 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| RC11_RS04675 (RC11_04665) | proC | 884588..885319 (+) | 732 | WP_002932769.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| RC11_RS04680 (RC11_04670) | ctsT | 885316..885618 (+) | 303 | WP_002932767.1 | transformation system protein | Machinery gene |
| RC11_RS04685 (RC11_04675) | - | 885615..886277 (+) | 663 | WP_002866103.1 | hypothetical protein | - |
| RC11_RS04690 (RC11_04680) | - | 886274..886726 (+) | 453 | WP_002869049.1 | hypothetical protein | - |
| RC11_RS04695 (RC11_04685) | hemD | 886723..887352 (-) | 630 | WP_002932761.1 | uroporphyrinogen-III synthase | - |
| RC11_RS04700 (RC11_04690) | thiE | 887330..887962 (-) | 633 | WP_002932757.1 | thiamine phosphate synthase | - |
| RC11_RS04705 (RC11_04695) | thiD | 887952..888764 (-) | 813 | WP_002869047.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| RC11_RS04710 (RC11_04700) | - | 888761..889447 (-) | 687 | WP_002932755.1 | 3-methyladenine DNA glycosylase | - |
| RC11_RS04715 (RC11_04705) | - | 889444..890205 (-) | 762 | WP_002856328.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12120.19 Da Isoelectric Point: 6.2957
>NTDB_id=138675 RC11_RS04680 WP_002932767.1 885316..885618(+) (ctsT) [Campylobacter jejuni strain CJ677CC052]
MKKAFILIESISAITIISLIFIGIFYYYAQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYAQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=138675 RC11_RS04680 WP_002932767.1 885316..885618(+) (ctsT) [Campylobacter jejuni strain CJ677CC052]
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATGCTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATGCTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |