Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | RC48_RS04410 | Genome accession | NZ_CP010499 |
| Coordinates | 823293..823595 (+) | Length | 100 a.a. |
| NCBI ID | WP_002932767.1 | Uniprot ID | A0A5T1CZF9 |
| Organism | Campylobacter jejuni strain CJ677CC542 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 818293..828595
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RC48_RS04385 (RC48_04385) | rpsR | 818655..818915 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| RC48_RS04390 (RC48_04390) | lon | 818976..821351 (-) | 2376 | WP_002866098.1 | endopeptidase La | - |
| RC48_RS04395 (RC48_04395) | - | 821368..822015 (-) | 648 | WP_002877748.1 | outer membrane protein assembly factor BamD | - |
| RC48_RS04400 (RC48_04400) | fliW | 822176..822565 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| RC48_RS04405 (RC48_04405) | proC | 822565..823296 (+) | 732 | WP_002932769.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| RC48_RS04410 (RC48_04410) | ctsT | 823293..823595 (+) | 303 | WP_002932767.1 | transformation system protein | Machinery gene |
| RC48_RS04415 (RC48_04415) | - | 823592..824254 (+) | 663 | WP_002866103.1 | hypothetical protein | - |
| RC48_RS04420 (RC48_04420) | - | 824251..824703 (+) | 453 | WP_002869049.1 | hypothetical protein | - |
| RC48_RS04425 (RC48_04425) | hemD | 824700..825329 (-) | 630 | WP_002932761.1 | uroporphyrinogen-III synthase | - |
| RC48_RS04430 (RC48_04430) | thiE | 825307..825939 (-) | 633 | WP_002932757.1 | thiamine phosphate synthase | - |
| RC48_RS04435 (RC48_04435) | thiD | 825929..826741 (-) | 813 | WP_002869047.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| RC48_RS04440 (RC48_04440) | - | 826738..827424 (-) | 687 | WP_002932755.1 | 3-methyladenine DNA glycosylase | - |
| RC48_RS04445 (RC48_04445) | - | 827421..828182 (-) | 762 | WP_002856328.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12120.19 Da Isoelectric Point: 6.2957
>NTDB_id=138516 RC48_RS04410 WP_002932767.1 823293..823595(+) (ctsT) [Campylobacter jejuni strain CJ677CC542]
MKKAFILIESISAITIISLIFIGIFYYYAQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYAQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=138516 RC48_RS04410 WP_002932767.1 823293..823595(+) (ctsT) [Campylobacter jejuni strain CJ677CC542]
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATGCTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATGCTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |