Detailed information
Bioinformatically predicted
Overview
| Name | Cj0683 | Type | Machinery gene |
| Locus tag | RC48_RS00955 | Genome accession | NZ_CP010499 |
| Coordinates | 161995..162432 (+) | Length | 145 a.a. |
| NCBI ID | WP_059110889.1 | Uniprot ID | - |
| Organism | Campylobacter jejuni strain CJ677CC542 | ||
| Function | initialization of DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 156995..167432
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RC48_RS00935 (RC48_00945) | kdpD | 157483..159414 (+) | 1932 | WP_002932500.1 | sensor histidine kinase KdpD | - |
| RC48_RS00940 (RC48_00950) | uvrB | 159409..161382 (-) | 1974 | WP_002932502.1 | excinuclease ABC subunit UvrB | - |
| RC48_RS00945 (RC48_00955) | - | 161536..161766 (+) | 231 | WP_002852327.1 | hypothetical protein | - |
| RC48_RS00950 (RC48_00960) | - | 161756..161998 (+) | 243 | WP_002854947.1 | hypothetical protein | - |
| RC48_RS00955 (RC48_00965) | Cj0683 | 161995..162432 (+) | 438 | WP_059110889.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | Machinery gene |
| RC48_RS00960 (RC48_00970) | priA | 162414..164267 (+) | 1854 | WP_002932503.1 | primosomal protein N' | - |
| RC48_RS08620 | - | 164260..164403 (-) | 144 | Protein_194 | sugar nucleotidyltransferase | - |
| RC48_RS08625 | - | 164375..164530 (+) | 156 | WP_079756590.1 | methyl-accepting chemotaxis protein | - |
| RC48_RS00965 (RC48_00975) | - | 164654..165163 (-) | 510 | WP_002934116.1 | DUF2393 family protein | - |
| RC48_RS00970 (RC48_00980) | - | 165163..165693 (-) | 531 | WP_002934113.1 | DUF2393 domain-containing protein | - |
| RC48_RS00975 (RC48_00985) | - | 165706..166794 (-) | 1089 | WP_002861052.1 | prohibitin family protein | - |
Sequence
Protein
Download Length: 145 a.a. Molecular weight: 16766.70 Da Isoelectric Point: 6.9036
>NTDB_id=138511 RC48_RS00955 WP_059110889.1 161995..162432(+) (Cj0683) [Campylobacter jejuni strain CJ677CC542]
MNKAFTLLELVFVILILGILSSLSLSFINTTKDEVKILKLKMDYEMLSSALALMRSQMRLENLNFPEILDNAQNNQAKEK
LFYCLNDCDYSLLDTPIYSDFKSWIKIGKNHYRFALNAKEMVEFIYDSKEGLLKCIGSSRCKDLI
MNKAFTLLELVFVILILGILSSLSLSFINTTKDEVKILKLKMDYEMLSSALALMRSQMRLENLNFPEILDNAQNNQAKEK
LFYCLNDCDYSLLDTPIYSDFKSWIKIGKNHYRFALNAKEMVEFIYDSKEGLLKCIGSSRCKDLI
Nucleotide
Download Length: 438 bp
>NTDB_id=138511 RC48_RS00955 WP_059110889.1 161995..162432(+) (Cj0683) [Campylobacter jejuni strain CJ677CC542]
ATGAATAAAGCTTTTACTTTGCTTGAGCTTGTTTTTGTGATTTTGATTTTGGGAATTTTATCAAGCTTATCTTTATCTTT
TATCAATACTACAAAAGATGAGGTTAAAATTTTAAAATTAAAAATGGACTATGAAATGCTAAGCTCAGCTCTTGCTTTAA
TGCGTAGTCAAATGAGACTTGAAAATTTAAATTTTCCAGAAATTTTAGATAATGCGCAAAACAATCAAGCCAAAGAAAAA
CTCTTTTATTGTTTAAATGATTGTGATTATTCTTTGCTTGATACACCTATTTATTCTGATTTTAAATCTTGGATAAAAAT
AGGTAAAAATCACTATAGATTTGCATTAAACGCCAAAGAGATGGTTGAATTTATTTATGATTCTAAAGAAGGTTTGTTAA
AGTGTATAGGAAGTTCTAGATGCAAAGATCTGATATAA
ATGAATAAAGCTTTTACTTTGCTTGAGCTTGTTTTTGTGATTTTGATTTTGGGAATTTTATCAAGCTTATCTTTATCTTT
TATCAATACTACAAAAGATGAGGTTAAAATTTTAAAATTAAAAATGGACTATGAAATGCTAAGCTCAGCTCTTGCTTTAA
TGCGTAGTCAAATGAGACTTGAAAATTTAAATTTTCCAGAAATTTTAGATAATGCGCAAAACAATCAAGCCAAAGAAAAA
CTCTTTTATTGTTTAAATGATTGTGATTATTCTTTGCTTGATACACCTATTTATTCTGATTTTAAATCTTGGATAAAAAT
AGGTAAAAATCACTATAGATTTGCATTAAACGCCAAAGAGATGGTTGAATTTATTTATGATTCTAAAGAAGGTTTGTTAA
AGTGTATAGGAAGTTCTAGATGCAAAGATCTGATATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| Cj0683 | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
99.31 |
100 |
0.993 |