Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | RC04_RS04440 | Genome accession | NZ_CP010497 |
| Coordinates | 830532..830834 (+) | Length | 100 a.a. |
| NCBI ID | WP_002932767.1 | Uniprot ID | A0A5T1CZF9 |
| Organism | Campylobacter jejuni strain CJ677CC033 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 825532..835834
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RC04_RS04415 (RC04_04425) | rpsR | 825894..826154 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| RC04_RS04420 (RC04_04430) | lon | 826215..828590 (-) | 2376 | WP_002866098.1 | endopeptidase La | - |
| RC04_RS04425 (RC04_04435) | - | 828607..829254 (-) | 648 | WP_002877748.1 | outer membrane protein assembly factor BamD | - |
| RC04_RS04430 (RC04_04440) | fliW | 829415..829804 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| RC04_RS04435 (RC04_04445) | proC | 829804..830535 (+) | 732 | WP_002932769.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| RC04_RS04440 (RC04_04450) | ctsT | 830532..830834 (+) | 303 | WP_002932767.1 | transformation system protein | Machinery gene |
| RC04_RS04445 (RC04_04455) | - | 830831..831493 (+) | 663 | WP_002866103.1 | hypothetical protein | - |
| RC04_RS04450 (RC04_04460) | - | 831490..831942 (+) | 453 | WP_002869049.1 | hypothetical protein | - |
| RC04_RS04455 (RC04_04465) | hemD | 831939..832568 (-) | 630 | WP_002932761.1 | uroporphyrinogen-III synthase | - |
| RC04_RS04460 (RC04_04470) | thiE | 832546..833178 (-) | 633 | WP_002932757.1 | thiamine phosphate synthase | - |
| RC04_RS04465 (RC04_04475) | thiD | 833168..833980 (-) | 813 | WP_002869047.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| RC04_RS04470 (RC04_04480) | - | 833977..834663 (-) | 687 | WP_002932755.1 | 3-methyladenine DNA glycosylase | - |
| RC04_RS04475 (RC04_04485) | - | 834660..835421 (-) | 762 | WP_002856328.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12120.19 Da Isoelectric Point: 6.2957
>NTDB_id=138464 RC04_RS04440 WP_002932767.1 830532..830834(+) (ctsT) [Campylobacter jejuni strain CJ677CC033]
MKKAFILIESISAITIISLIFIGIFYYYAQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYAQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=138464 RC04_RS04440 WP_002932767.1 830532..830834(+) (ctsT) [Campylobacter jejuni strain CJ677CC033]
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATGCTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATGCTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |