Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | RC03_RS05445 | Genome accession | NZ_CP010496 |
| Coordinates | 1017522..1017824 (+) | Length | 100 a.a. |
| NCBI ID | WP_002932767.1 | Uniprot ID | A0A5T1CZF9 |
| Organism | Campylobacter jejuni strain CJ677CC032 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1012522..1022824
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RC03_RS05420 (RC03_05420) | rpsR | 1012884..1013144 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| RC03_RS05425 (RC03_05425) | lon | 1013205..1015580 (-) | 2376 | WP_002866098.1 | endopeptidase La | - |
| RC03_RS05430 (RC03_05430) | - | 1015597..1016244 (-) | 648 | WP_002877748.1 | outer membrane protein assembly factor BamD | - |
| RC03_RS05435 (RC03_05435) | fliW | 1016405..1016794 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| RC03_RS05440 (RC03_05440) | proC | 1016794..1017525 (+) | 732 | WP_002932769.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| RC03_RS05445 (RC03_05445) | ctsT | 1017522..1017824 (+) | 303 | WP_002932767.1 | transformation system protein | Machinery gene |
| RC03_RS05450 (RC03_05450) | - | 1017821..1018483 (+) | 663 | WP_002866103.1 | hypothetical protein | - |
| RC03_RS05455 (RC03_05455) | - | 1018480..1018932 (+) | 453 | WP_002869049.1 | hypothetical protein | - |
| RC03_RS05460 (RC03_05460) | hemD | 1018929..1019558 (-) | 630 | WP_002932761.1 | uroporphyrinogen-III synthase | - |
| RC03_RS05465 (RC03_05465) | thiE | 1019536..1020168 (-) | 633 | WP_002932757.1 | thiamine phosphate synthase | - |
| RC03_RS05470 (RC03_05470) | thiD | 1020158..1020970 (-) | 813 | WP_002869047.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| RC03_RS05475 (RC03_05475) | - | 1020967..1021653 (-) | 687 | WP_002932755.1 | 3-methyladenine DNA glycosylase | - |
| RC03_RS05480 (RC03_05480) | - | 1021650..1022411 (-) | 762 | WP_002856328.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12120.19 Da Isoelectric Point: 6.2957
>NTDB_id=138440 RC03_RS05445 WP_002932767.1 1017522..1017824(+) (ctsT) [Campylobacter jejuni strain CJ677CC032]
MKKAFILIESISAITIISLIFIGIFYYYAQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYAQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=138440 RC03_RS05445 WP_002932767.1 1017522..1017824(+) (ctsT) [Campylobacter jejuni strain CJ677CC032]
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATGCTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATGCTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |