Detailed information
Bioinformatically predicted
Overview
| Name | ctsF | Type | Machinery gene |
| Locus tag | RC44_RS07305 | Genome accession | NZ_CP010495 |
| Coordinates | 1384564..1385742 (-) | Length | 392 a.a. |
| NCBI ID | WP_002932300.1 | Uniprot ID | A0A5T1D2G9 |
| Organism | Campylobacter jejuni strain CJ677CC538 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1379564..1390742
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RC44_RS07275 (RC44_07270) | - | 1380106..1380447 (+) | 342 | WP_002932295.1 | hypothetical protein | - |
| RC44_RS07280 (RC44_07275) | flgM | 1380510..1380707 (+) | 198 | WP_002792053.1 | flagellar biosynthesis anti-sigma factor FlgM | - |
| RC44_RS07285 (RC44_07280) | - | 1380749..1381183 (+) | 435 | WP_002779263.1 | flagellar protein FlgN | - |
| RC44_RS07290 (RC44_07285) | flgK | 1381193..1383019 (+) | 1827 | WP_002932296.1 | flagellar hook-associated protein FlgK | - |
| RC44_RS07295 (RC44_07290) | - | 1383036..1383800 (+) | 765 | WP_002932297.1 | TIGR02757 family protein | - |
| RC44_RS07300 (RC44_07295) | - | 1383803..1384567 (+) | 765 | WP_002932298.1 | TSUP family transporter | - |
| RC44_RS07305 (RC44_07300) | ctsF | 1384564..1385742 (-) | 1179 | WP_002932300.1 | type II secretion system F family protein | Machinery gene |
| RC44_RS07310 (RC44_07305) | ctsE | 1385739..1387298 (-) | 1560 | WP_032598692.1 | GspE/PulE family protein | Machinery gene |
| RC44_RS07315 (RC44_07310) | ctsX | 1387288..1387875 (-) | 588 | WP_002932306.1 | hypothetical protein | Machinery gene |
| RC44_RS07320 (RC44_07315) | ctsP | 1387879..1388487 (-) | 609 | WP_002932308.1 | ATP-binding protein | Machinery gene |
| RC44_RS07325 (RC44_07320) | mshL | 1388480..1389892 (-) | 1413 | Protein_1445 | pilus (MSHA type) biogenesis protein MshL | - |
| RC44_RS07330 (RC44_07325) | ctsR | 1389870..1390181 (-) | 312 | WP_002932309.1 | hypothetical protein | Machinery gene |
Sequence
Protein
Download Length: 392 a.a. Molecular weight: 45674.31 Da Isoelectric Point: 9.0938
>NTDB_id=138422 RC44_RS07305 WP_002932300.1 1384564..1385742(-) (ctsF) [Campylobacter jejuni strain CJ677CC538]
MKFYEVEFLKNNQNYTKTIKAENLNTAQAKALSKNWKIIDIKEIQKSNFQRLKDENFILFFKELALLCEVGLSVQEAIRE
LYLMHSCKIMKKILDNLILAQNLNQAFENANFGLNRAELALIKTAEKTGKISEVFSQISKLREKSLESQKQLKKAFRYPT
LVFLSIIGAFLFLMLFVVPNFKDLFENLGTSLPFITHVMLEIYNFLDDYGIFCIFLFVIFIVMLILAYKNFHSFAFSCDF
LFLKIPLISRLIIYNQNYYFFMVFSLLLKNGISISKAFDLAIIGLENKFLIFQYKKLFSFIDSGLELSQAFKKIDIFDSL
VFSMLSVAMKSGRLEVLSEEIAKYYQQKSENLMDRFLIFLEPMMTLFVALLVLFLALGIFLPMWELSSGINF
MKFYEVEFLKNNQNYTKTIKAENLNTAQAKALSKNWKIIDIKEIQKSNFQRLKDENFILFFKELALLCEVGLSVQEAIRE
LYLMHSCKIMKKILDNLILAQNLNQAFENANFGLNRAELALIKTAEKTGKISEVFSQISKLREKSLESQKQLKKAFRYPT
LVFLSIIGAFLFLMLFVVPNFKDLFENLGTSLPFITHVMLEIYNFLDDYGIFCIFLFVIFIVMLILAYKNFHSFAFSCDF
LFLKIPLISRLIIYNQNYYFFMVFSLLLKNGISISKAFDLAIIGLENKFLIFQYKKLFSFIDSGLELSQAFKKIDIFDSL
VFSMLSVAMKSGRLEVLSEEIAKYYQQKSENLMDRFLIFLEPMMTLFVALLVLFLALGIFLPMWELSSGINF
Nucleotide
Download Length: 1179 bp
>NTDB_id=138422 RC44_RS07305 WP_002932300.1 1384564..1385742(-) (ctsF) [Campylobacter jejuni strain CJ677CC538]
ATGAAATTTTATGAAGTAGAATTTCTTAAAAACAATCAAAATTATACAAAAACTATAAAAGCTGAAAATTTAAATACAGC
ACAAGCAAAAGCCTTATCAAAGAATTGGAAAATCATTGATATAAAAGAAATTCAAAAATCTAATTTTCAGAGATTAAAAG
ATGAAAATTTTATACTCTTTTTTAAAGAGCTGGCTTTGTTGTGTGAAGTTGGATTAAGTGTTCAAGAAGCGATTAGAGAA
TTATATCTTATGCATTCTTGCAAGATTATGAAAAAAATATTAGACAATTTAATTTTAGCTCAAAATCTAAATCAAGCTTT
TGAAAATGCTAATTTTGGATTAAATCGTGCGGAGTTAGCTTTGATTAAAACGGCTGAAAAGACAGGAAAAATCAGCGAAG
TGTTTAGTCAAATTTCTAAACTTCGAGAAAAAAGCTTAGAGAGTCAAAAACAATTAAAAAAGGCTTTTAGATATCCTACT
TTGGTTTTTTTAAGTATTATCGGAGCATTTTTGTTTTTAATGCTTTTTGTAGTGCCTAATTTTAAAGATTTATTTGAAAA
TTTAGGCACGAGTTTGCCTTTTATCACGCATGTAATGTTAGAAATTTATAATTTTTTAGATGACTATGGAATTTTTTGCA
TATTTTTGTTTGTTATTTTTATTGTTATGCTTATTTTAGCTTATAAAAATTTTCATTCTTTTGCTTTTTCTTGCGATTTT
TTATTTTTAAAAATACCTTTGATTTCTCGTTTGATTATTTATAATCAAAATTATTATTTTTTTATGGTTTTTTCTTTGCT
TTTAAAAAATGGAATTTCAATATCCAAAGCTTTTGATTTAGCTATTATAGGGCTTGAAAATAAATTTTTAATTTTTCAGT
ATAAAAAACTTTTTAGTTTTATAGATTCTGGTCTTGAGTTAAGTCAGGCTTTTAAAAAGATTGATATTTTTGATTCTTTG
GTATTTTCTATGCTTAGTGTTGCGATGAAAAGCGGAAGACTTGAAGTGTTAAGTGAAGAAATTGCCAAATATTATCAACA
AAAAAGCGAAAATTTAATGGATAGATTTTTGATTTTTTTAGAGCCTATGATGACTTTATTTGTGGCGCTTTTAGTTTTGT
TTTTGGCTTTAGGTATATTTTTACCTATGTGGGAGCTTAGTTCAGGTATAAATTTTTAA
ATGAAATTTTATGAAGTAGAATTTCTTAAAAACAATCAAAATTATACAAAAACTATAAAAGCTGAAAATTTAAATACAGC
ACAAGCAAAAGCCTTATCAAAGAATTGGAAAATCATTGATATAAAAGAAATTCAAAAATCTAATTTTCAGAGATTAAAAG
ATGAAAATTTTATACTCTTTTTTAAAGAGCTGGCTTTGTTGTGTGAAGTTGGATTAAGTGTTCAAGAAGCGATTAGAGAA
TTATATCTTATGCATTCTTGCAAGATTATGAAAAAAATATTAGACAATTTAATTTTAGCTCAAAATCTAAATCAAGCTTT
TGAAAATGCTAATTTTGGATTAAATCGTGCGGAGTTAGCTTTGATTAAAACGGCTGAAAAGACAGGAAAAATCAGCGAAG
TGTTTAGTCAAATTTCTAAACTTCGAGAAAAAAGCTTAGAGAGTCAAAAACAATTAAAAAAGGCTTTTAGATATCCTACT
TTGGTTTTTTTAAGTATTATCGGAGCATTTTTGTTTTTAATGCTTTTTGTAGTGCCTAATTTTAAAGATTTATTTGAAAA
TTTAGGCACGAGTTTGCCTTTTATCACGCATGTAATGTTAGAAATTTATAATTTTTTAGATGACTATGGAATTTTTTGCA
TATTTTTGTTTGTTATTTTTATTGTTATGCTTATTTTAGCTTATAAAAATTTTCATTCTTTTGCTTTTTCTTGCGATTTT
TTATTTTTAAAAATACCTTTGATTTCTCGTTTGATTATTTATAATCAAAATTATTATTTTTTTATGGTTTTTTCTTTGCT
TTTAAAAAATGGAATTTCAATATCCAAAGCTTTTGATTTAGCTATTATAGGGCTTGAAAATAAATTTTTAATTTTTCAGT
ATAAAAAACTTTTTAGTTTTATAGATTCTGGTCTTGAGTTAAGTCAGGCTTTTAAAAAGATTGATATTTTTGATTCTTTG
GTATTTTCTATGCTTAGTGTTGCGATGAAAAGCGGAAGACTTGAAGTGTTAAGTGAAGAAATTGCCAAATATTATCAACA
AAAAAGCGAAAATTTAATGGATAGATTTTTGATTTTTTTAGAGCCTATGATGACTTTATTTGTGGCGCTTTTAGTTTTGT
TTTTGGCTTTAGGTATATTTTTACCTATGTGGGAGCTTAGTTCAGGTATAAATTTTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsF | Campylobacter jejuni subsp. jejuni 81-176 |
98.469 |
100 |
0.985 |