Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | RC44_RS05435 | Genome accession | NZ_CP010495 |
| Coordinates | 1012731..1013033 (+) | Length | 100 a.a. |
| NCBI ID | WP_002932767.1 | Uniprot ID | A0A5T1CZF9 |
| Organism | Campylobacter jejuni strain CJ677CC538 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1007731..1018033
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RC44_RS05410 (RC44_05410) | rpsR | 1008093..1008353 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| RC44_RS05415 (RC44_05415) | lon | 1008414..1010789 (-) | 2376 | WP_002866098.1 | endopeptidase La | - |
| RC44_RS05420 (RC44_05420) | - | 1010806..1011453 (-) | 648 | WP_002877748.1 | outer membrane protein assembly factor BamD | - |
| RC44_RS05425 (RC44_05425) | fliW | 1011614..1012003 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| RC44_RS05430 (RC44_05430) | proC | 1012003..1012734 (+) | 732 | WP_002932769.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| RC44_RS05435 (RC44_05435) | ctsT | 1012731..1013033 (+) | 303 | WP_002932767.1 | transformation system protein | Machinery gene |
| RC44_RS05440 (RC44_05440) | - | 1013030..1013692 (+) | 663 | WP_002866103.1 | hypothetical protein | - |
| RC44_RS05445 (RC44_05445) | - | 1013689..1014141 (+) | 453 | WP_002869049.1 | hypothetical protein | - |
| RC44_RS05450 (RC44_05450) | hemD | 1014138..1014767 (-) | 630 | WP_002932761.1 | uroporphyrinogen-III synthase | - |
| RC44_RS05455 (RC44_05455) | thiE | 1014745..1015377 (-) | 633 | WP_002932757.1 | thiamine phosphate synthase | - |
| RC44_RS05460 (RC44_05460) | thiD | 1015367..1016179 (-) | 813 | WP_002869047.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| RC44_RS05465 (RC44_05465) | - | 1016176..1016862 (-) | 687 | WP_002932755.1 | 3-methyladenine DNA glycosylase | - |
| RC44_RS05470 (RC44_05470) | - | 1016859..1017620 (-) | 762 | WP_002932753.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12120.19 Da Isoelectric Point: 6.2957
>NTDB_id=138413 RC44_RS05435 WP_002932767.1 1012731..1013033(+) (ctsT) [Campylobacter jejuni strain CJ677CC538]
MKKAFILIESISAITIISLIFIGIFYYYAQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYAQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=138413 RC44_RS05435 WP_002932767.1 1012731..1013033(+) (ctsT) [Campylobacter jejuni strain CJ677CC538]
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATGCTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATGCTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |