Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | RC13_RS04705 | Genome accession | NZ_CP010494 |
| Coordinates | 890280..890582 (+) | Length | 100 a.a. |
| NCBI ID | WP_002932767.1 | Uniprot ID | A0A5T1CZF9 |
| Organism | Campylobacter jejuni strain CJ677CC059 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 885280..895582
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RC13_RS04680 (RC13_04670) | rpsR | 885642..885902 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| RC13_RS04685 (RC13_04675) | lon | 885963..888338 (-) | 2376 | WP_002866098.1 | endopeptidase La | - |
| RC13_RS04690 (RC13_04680) | - | 888355..889002 (-) | 648 | WP_002877748.1 | outer membrane protein assembly factor BamD | - |
| RC13_RS04695 (RC13_04685) | fliW | 889163..889552 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| RC13_RS04700 (RC13_04690) | proC | 889552..890283 (+) | 732 | WP_002932769.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| RC13_RS04705 (RC13_04695) | ctsT | 890280..890582 (+) | 303 | WP_002932767.1 | transformation system protein | Machinery gene |
| RC13_RS04710 (RC13_04700) | - | 890579..891241 (+) | 663 | WP_002866103.1 | hypothetical protein | - |
| RC13_RS04715 (RC13_04705) | - | 891238..891690 (+) | 453 | WP_002869049.1 | hypothetical protein | - |
| RC13_RS04720 (RC13_04710) | hemD | 891687..892316 (-) | 630 | WP_002932761.1 | uroporphyrinogen-III synthase | - |
| RC13_RS04725 (RC13_04715) | thiE | 892294..892926 (-) | 633 | WP_002932757.1 | thiamine phosphate synthase | - |
| RC13_RS04730 (RC13_04720) | thiD | 892916..893728 (-) | 813 | WP_002869047.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| RC13_RS04735 (RC13_04725) | - | 893725..894411 (-) | 687 | WP_002932755.1 | 3-methyladenine DNA glycosylase | - |
| RC13_RS04740 (RC13_04730) | - | 894408..895169 (-) | 762 | WP_002932753.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12120.19 Da Isoelectric Point: 6.2957
>NTDB_id=138384 RC13_RS04705 WP_002932767.1 890280..890582(+) (ctsT) [Campylobacter jejuni strain CJ677CC059]
MKKAFILIESISAITIISLIFIGIFYYYAQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYAQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=138384 RC13_RS04705 WP_002932767.1 890280..890582(+) (ctsT) [Campylobacter jejuni strain CJ677CC059]
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATGCTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATGCTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |