Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | RC15_RS05115 | Genome accession | NZ_CP010493 |
| Coordinates | 963928..964230 (+) | Length | 100 a.a. |
| NCBI ID | WP_002932767.1 | Uniprot ID | A0A5T1CZF9 |
| Organism | Campylobacter jejuni strain CJ677CC062 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 958928..969230
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RC15_RS05090 (RC15_05080) | rpsR | 959290..959550 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| RC15_RS05095 (RC15_05085) | lon | 959611..961986 (-) | 2376 | WP_002866098.1 | endopeptidase La | - |
| RC15_RS05100 (RC15_05090) | - | 962003..962650 (-) | 648 | WP_002877748.1 | outer membrane protein assembly factor BamD | - |
| RC15_RS05105 (RC15_05095) | fliW | 962811..963200 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| RC15_RS05110 (RC15_05100) | proC | 963200..963931 (+) | 732 | WP_002932769.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| RC15_RS05115 (RC15_05105) | ctsT | 963928..964230 (+) | 303 | WP_002932767.1 | transformation system protein | Machinery gene |
| RC15_RS05120 (RC15_05110) | - | 964227..964889 (+) | 663 | WP_002866103.1 | hypothetical protein | - |
| RC15_RS05125 (RC15_05115) | - | 964886..965338 (+) | 453 | WP_002869049.1 | hypothetical protein | - |
| RC15_RS05130 (RC15_05120) | hemD | 965335..965964 (-) | 630 | WP_002932761.1 | uroporphyrinogen-III synthase | - |
| RC15_RS05135 (RC15_05125) | thiE | 965942..966574 (-) | 633 | WP_002932757.1 | thiamine phosphate synthase | - |
| RC15_RS05140 (RC15_05130) | thiD | 966564..967376 (-) | 813 | WP_002869047.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| RC15_RS05145 (RC15_05135) | - | 967373..968059 (-) | 687 | WP_002932755.1 | 3-methyladenine DNA glycosylase | - |
| RC15_RS05150 (RC15_05140) | - | 968056..968817 (-) | 762 | WP_059115961.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12120.19 Da Isoelectric Point: 6.2957
>NTDB_id=138359 RC15_RS05115 WP_002932767.1 963928..964230(+) (ctsT) [Campylobacter jejuni strain CJ677CC062]
MKKAFILIESISAITIISLIFIGIFYYYAQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYAQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=138359 RC15_RS05115 WP_002932767.1 963928..964230(+) (ctsT) [Campylobacter jejuni strain CJ677CC062]
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATGCTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATGCTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |