Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | MJ49_RS07225 | Genome accession | NZ_CP013025 |
| Coordinates | 1284572..1285012 (+) | Length | 146 a.a. |
| NCBI ID | WP_000360904.1 | Uniprot ID | P36647 |
| Organism | Escherichia coli strain 2009C-3133 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1279572..1290012
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MJ49_RS07200 (MJ49_06480) | aroP | 1280573..1281943 (+) | 1371 | WP_000399017.1 | aromatic amino acid transporter AroP | - |
| MJ49_RS07205 (MJ49_06485) | ampE | 1281986..1282840 (-) | 855 | WP_000171975.1 | beta-lactamase regulator AmpE | - |
| MJ49_RS07210 (MJ49_06490) | ampD | 1282837..1283388 (-) | 552 | WP_000923730.1 | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | - |
| MJ49_RS07215 (MJ49_06495) | nadC | 1283476..1284369 (+) | 894 | WP_001135153.1 | carboxylating nicotinate-nucleotide diphosphorylase | - |
| MJ49_RS07225 (MJ49_06505) | pilA | 1284572..1285012 (+) | 441 | WP_000360904.1 | prepilin peptidase-dependent pilin | Machinery gene |
| MJ49_RS07230 (MJ49_06510) | pilB | 1285022..1286407 (+) | 1386 | WP_001025165.1 | type II secretion system protein GspE | Machinery gene |
| MJ49_RS07235 (MJ49_06515) | hofC | 1286397..1287599 (+) | 1203 | WP_000157293.1 | protein transport protein HofC | - |
| MJ49_RS07240 (MJ49_06520) | guaC | 1287634..1288677 (-) | 1044 | WP_001217338.1 | GMP reductase | - |
| MJ49_RS32720 | - | 1288833..1288877 (-) | 45 | WP_120795372.1 | protein YacM | - |
| MJ49_RS07245 (MJ49_06525) | coaE | 1288902..1289522 (+) | 621 | WP_001269512.1 | dephospho-CoA kinase | - |
Sequence
Protein
Download Length: 146 a.a. Molecular weight: 15621.75 Da Isoelectric Point: 4.3938
>NTDB_id=138341 MJ49_RS07225 WP_000360904.1 1284572..1285012(+) (pilA) [Escherichia coli strain 2009C-3133]
MDKQRGFTLIELMVVIGIIAILSAIGIPAYQNYLRKAALTDMLQTFVPYRTAVELCALEHGGLDTCDGGSNGIPSPTTTR
YVSAMSVAKGVVSLTGQESLNGLSVVMTPGWDNANGVTGWTRNCNIQSDSALQQACEDVFRFDDAN
MDKQRGFTLIELMVVIGIIAILSAIGIPAYQNYLRKAALTDMLQTFVPYRTAVELCALEHGGLDTCDGGSNGIPSPTTTR
YVSAMSVAKGVVSLTGQESLNGLSVVMTPGWDNANGVTGWTRNCNIQSDSALQQACEDVFRFDDAN
Nucleotide
Download Length: 441 bp
>NTDB_id=138341 MJ49_RS07225 WP_000360904.1 1284572..1285012(+) (pilA) [Escherichia coli strain 2009C-3133]
ATGGACAAGCAACGCGGTTTTACACTTATCGAACTGATGGTGGTTATTGGCATCATTGCCATTTTAAGCGCCATTGGTAT
TCCCGCTTATCAAAACTACCTGCGCAAAGCCGCACTCACCGACATGCTACAAACCTTTGTGCCTTACCGTACCGCCGTAG
AGTTGTGCGCGCTGGAACATGGTGGATTAGATACCTGCGACGGTGGCAGCAATGGCATTCCCTCGCCTACCACCACCCGC
TATGTTTCAGCCATGAGTGTGGCAAAGGGCGTGGTGTCGCTGACCGGGCAAGAAAGTCTCAATGGGCTAAGCGTCGTCAT
GACACCGGGTTGGGATAACGCAAACGGCGTCACCGGCTGGACGCGCAACTGCAATATTCAAAGTGACAGCGCATTGCAGC
AAGCCTGCGAAGATGTCTTTCGCTTTGATGACGCCAACTAA
ATGGACAAGCAACGCGGTTTTACACTTATCGAACTGATGGTGGTTATTGGCATCATTGCCATTTTAAGCGCCATTGGTAT
TCCCGCTTATCAAAACTACCTGCGCAAAGCCGCACTCACCGACATGCTACAAACCTTTGTGCCTTACCGTACCGCCGTAG
AGTTGTGCGCGCTGGAACATGGTGGATTAGATACCTGCGACGGTGGCAGCAATGGCATTCCCTCGCCTACCACCACCCGC
TATGTTTCAGCCATGAGTGTGGCAAAGGGCGTGGTGTCGCTGACCGGGCAAGAAAGTCTCAATGGGCTAAGCGTCGTCAT
GACACCGGGTTGGGATAACGCAAACGGCGTCACCGGCTGGACGCGCAACTGCAATATTCAAAGTGACAGCGCATTGCAGC
AAGCCTGCGAAGATGTCTTTCGCTTTGATGACGCCAACTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Haemophilus influenzae 86-028NP |
43.089 |
84.247 |
0.363 |