Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | RC36_RS05305 | Genome accession | NZ_CP010489 |
| Coordinates | 993329..993631 (+) | Length | 100 a.a. |
| NCBI ID | WP_002932767.1 | Uniprot ID | A0A5T1CZF9 |
| Organism | Campylobacter jejuni strain CJ677CC530 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 988329..998631
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RC36_RS05280 (RC36_05275) | rpsR | 988691..988951 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| RC36_RS05285 (RC36_05280) | lon | 989012..991387 (-) | 2376 | WP_002866098.1 | endopeptidase La | - |
| RC36_RS05290 (RC36_05285) | - | 991404..992051 (-) | 648 | WP_002877748.1 | outer membrane protein assembly factor BamD | - |
| RC36_RS05295 (RC36_05290) | fliW | 992212..992601 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| RC36_RS05300 (RC36_05295) | proC | 992601..993332 (+) | 732 | WP_002932769.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| RC36_RS05305 (RC36_05300) | ctsT | 993329..993631 (+) | 303 | WP_002932767.1 | transformation system protein | Machinery gene |
| RC36_RS05310 (RC36_05305) | - | 993628..994290 (+) | 663 | WP_048818624.1 | hypothetical protein | - |
| RC36_RS05315 (RC36_05310) | - | 994287..994739 (+) | 453 | WP_002869049.1 | hypothetical protein | - |
| RC36_RS05320 (RC36_05315) | hemD | 994736..995365 (-) | 630 | WP_002932761.1 | uroporphyrinogen-III synthase | - |
| RC36_RS05325 (RC36_05320) | thiE | 995343..995975 (-) | 633 | WP_002932757.1 | thiamine phosphate synthase | - |
| RC36_RS05330 (RC36_05325) | thiD | 995965..996777 (-) | 813 | WP_002869047.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| RC36_RS05335 (RC36_05330) | - | 996774..997460 (-) | 687 | WP_002932755.1 | 3-methyladenine DNA glycosylase | - |
| RC36_RS05340 (RC36_05335) | - | 997457..998218 (-) | 762 | WP_002932753.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12120.19 Da Isoelectric Point: 6.2957
>NTDB_id=138253 RC36_RS05305 WP_002932767.1 993329..993631(+) (ctsT) [Campylobacter jejuni strain CJ677CC530]
MKKAFILIESISAITIISLIFIGIFYYYAQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYAQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=138253 RC36_RS05305 WP_002932767.1 993329..993631(+) (ctsT) [Campylobacter jejuni strain CJ677CC530]
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATGCTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATGCTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |