Detailed information
Bioinformatically predicted
Overview
| Name | CJE0566 | Type | Regulator |
| Locus tag | RC36_RS02520 | Genome accession | NZ_CP010489 |
| Coordinates | 448531..449184 (-) | Length | 217 a.a. |
| NCBI ID | WP_059111151.1 | Uniprot ID | - |
| Organism | Campylobacter jejuni strain CJ677CC530 | ||
| Function | repress natural transformation (predicted from homology) Competence regulation |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 435481..464764 | 448531..449184 | within | 0 |
Gene organization within MGE regions
Location: 435481..464764
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RC36_RS02400 (RC36_02405) | - | 435481..436683 (+) | 1203 | WP_052844203.1 | site-specific integrase | - |
| RC36_RS02405 (RC36_02410) | - | 436680..436850 (-) | 171 | WP_002864902.1 | helix-turn-helix domain-containing protein | - |
| RC36_RS02410 (RC36_02415) | - | 436843..437385 (-) | 543 | WP_059111110.1 | pentapeptide repeat-containing protein | - |
| RC36_RS02415 (RC36_02420) | - | 437373..437573 (-) | 201 | WP_059111111.1 | hypothetical protein | - |
| RC36_RS02420 (RC36_02425) | - | 437614..438033 (-) | 420 | WP_059111112.1 | YopX family protein | - |
| RC36_RS02425 (RC36_02430) | - | 438037..438735 (-) | 699 | WP_059111113.1 | antA/AntB antirepressor family protein | - |
| RC36_RS02430 (RC36_02435) | - | 438909..439304 (-) | 396 | WP_059111114.1 | hypothetical protein | - |
| RC36_RS02435 (RC36_02440) | - | 439317..439589 (-) | 273 | WP_059111115.1 | hypothetical protein | - |
| RC36_RS02440 (RC36_02445) | - | 439582..439905 (-) | 324 | WP_059111116.1 | hypothetical protein | - |
| RC36_RS02445 (RC36_02450) | - | 439969..440856 (-) | 888 | WP_002896047.1 | hypothetical protein | - |
| RC36_RS02450 (RC36_02455) | - | 440902..441654 (-) | 753 | WP_059111117.1 | site-specific DNA-methyltransferase | - |
| RC36_RS02455 (RC36_02460) | - | 441656..441913 (-) | 258 | WP_059111150.1 | hypothetical protein | - |
| RC36_RS02460 (RC36_02465) | - | 441894..442592 (-) | 699 | WP_059111118.1 | hypothetical protein | - |
| RC36_RS02465 (RC36_02470) | - | 442592..443326 (-) | 735 | WP_059111119.1 | hypothetical protein | - |
| RC36_RS02470 (RC36_02475) | - | 443328..444182 (-) | 855 | WP_048818565.1 | lambda-exonuclease family protein | - |
| RC36_RS02475 (RC36_02480) | - | 444172..444915 (-) | 744 | WP_048818566.1 | phage regulatory protein/antirepressor Ant | - |
| RC36_RS02480 (RC36_02485) | - | 444912..445094 (-) | 183 | WP_002900944.1 | hypothetical protein | - |
| RC36_RS02485 (RC36_02490) | - | 445239..445454 (+) | 216 | WP_048818567.1 | hypothetical protein | - |
| RC36_RS09015 | - | 445424..445588 (-) | 165 | WP_194717242.1 | hypothetical protein | - |
| RC36_RS02490 (RC36_02495) | - | 445585..445839 (-) | 255 | WP_048818568.1 | hypothetical protein | - |
| RC36_RS02495 (RC36_02500) | - | 445830..446099 (-) | 270 | WP_002783984.1 | hypothetical protein | - |
| RC36_RS02500 (RC36_02505) | - | 446456..446728 (-) | 273 | WP_059111120.1 | hypothetical protein | - |
| RC36_RS02505 (RC36_02510) | - | 446908..447678 (+) | 771 | WP_059111121.1 | sel1 repeat family protein | - |
| RC36_RS02510 (RC36_02515) | - | 447682..447957 (-) | 276 | WP_004296768.1 | hypothetical protein | - |
| RC36_RS02515 (RC36_02520) | - | 447944..448450 (-) | 507 | WP_059111122.1 | Panacea domain-containing protein | - |
| RC36_RS02520 (RC36_02525) | CJE0566 | 448531..449184 (-) | 654 | WP_059111151.1 | DNA/RNA non-specific endonuclease | Regulator |
| RC36_RS02525 (RC36_02530) | - | 449204..449977 (-) | 774 | WP_002929400.1 | hypothetical protein | - |
| RC36_RS02530 (RC36_02535) | - | 449974..450705 (-) | 732 | WP_002929403.1 | S24 family peptidase | - |
| RC36_RS02535 (RC36_02540) | - | 450846..451061 (+) | 216 | WP_002925661.1 | hypothetical protein | - |
| RC36_RS08800 | - | 451157..451456 (+) | 300 | WP_002861657.1 | hypothetical protein | - |
| RC36_RS02545 (RC36_02550) | - | 451453..452454 (+) | 1002 | WP_059111123.1 | hypothetical protein | - |
| RC36_RS02550 (RC36_02555) | - | 452465..453115 (+) | 651 | WP_002861659.1 | hypothetical protein | - |
| RC36_RS02555 (RC36_02560) | - | 453133..453513 (+) | 381 | WP_002861660.1 | hypothetical protein | - |
| RC36_RS02560 (RC36_02565) | - | 453513..453899 (+) | 387 | WP_002826748.1 | terminase small subunit | - |
| RC36_RS02565 (RC36_02570) | - | 453896..455188 (+) | 1293 | WP_059111124.1 | terminase | - |
| RC36_RS02570 (RC36_02575) | - | 455178..455450 (+) | 273 | WP_057031814.1 | hypothetical protein | - |
| RC36_RS02575 (RC36_02580) | - | 455431..456969 (+) | 1539 | WP_002875071.1 | hypothetical protein | - |
| RC36_RS02580 (RC36_02585) | - | 456962..457165 (+) | 204 | WP_002875072.1 | hypothetical protein | - |
| RC36_RS02585 (RC36_02590) | - | 457155..457802 (+) | 648 | WP_059111125.1 | hypothetical protein | - |
| RC36_RS02590 (RC36_02595) | - | 457813..458193 (+) | 381 | WP_059111126.1 | hypothetical protein | - |
| RC36_RS02595 (RC36_02600) | - | 458458..459672 (+) | 1215 | WP_059111127.1 | hypothetical protein | - |
| RC36_RS09020 (RC36_02605) | - | 459669..463349 (+) | 3681 | WP_059111128.1 | PBECR2 nuclease fold domain-containing protein | - |
| RC36_RS02605 (RC36_02610) | - | 463730..464764 (+) | 1035 | WP_002875076.1 | DUF5309 family protein | - |
Sequence
Protein
Download Length: 217 a.a. Molecular weight: 25586.14 Da Isoelectric Point: 9.8271
>NTDB_id=138248 RC36_RS02520 WP_059111151.1 448531..449184(-) (CJE0566) [Campylobacter jejuni strain CJ677CC530]
MKKLILLPLLSTLAFADYTQYKPSEDFAKYFTKQNCSQVLDKFYYLNCYDYNYKGTKAVAYKLEAENLKGEQIKKRPRFE
DDTNIPKKYRTTWSDYKNSGYDRGHTISNASMRKTTQAQRSTFLMSNITPQNPQINQRVWNKIEKRERQVALKLGSLEVL
NLVNYDSNPQRIKNQIAIPNSYTKILKGDNFKECYQVPNHEVEDENIKKYKVNCDKI
MKKLILLPLLSTLAFADYTQYKPSEDFAKYFTKQNCSQVLDKFYYLNCYDYNYKGTKAVAYKLEAENLKGEQIKKRPRFE
DDTNIPKKYRTTWSDYKNSGYDRGHTISNASMRKTTQAQRSTFLMSNITPQNPQINQRVWNKIEKRERQVALKLGSLEVL
NLVNYDSNPQRIKNQIAIPNSYTKILKGDNFKECYQVPNHEVEDENIKKYKVNCDKI
Nucleotide
Download Length: 654 bp
>NTDB_id=138248 RC36_RS02520 WP_059111151.1 448531..449184(-) (CJE0566) [Campylobacter jejuni strain CJ677CC530]
GTGAAAAAACTCATACTTTTGCCATTGTTATCCACTCTAGCTTTTGCTGATTACACACAATATAAACCGAGTGAAGATTT
TGCAAAGTATTTTACTAAACAAAACTGCTCTCAAGTTTTAGATAAGTTTTATTATCTAAATTGTTATGATTATAATTATA
AAGGCACTAAAGCTGTAGCTTATAAATTAGAAGCGGAAAATTTAAAAGGCGAACAAATTAAAAAACGCCCACGATTTGAA
GATGATACAAATATACCTAAAAAATACCGCACTACATGGAGTGATTATAAAAACAGCGGTTATGATAGAGGGCATACTAT
TTCTAATGCTTCAATGAGAAAAACAACTCAAGCCCAAAGAAGCACTTTTTTAATGAGTAATATTACTCCGCAAAATCCAC
AGATCAATCAAAGGGTTTGGAACAAGATTGAAAAAAGAGAAAGACAAGTAGCTTTAAAACTTGGAAGTTTAGAAGTTTTA
AATTTGGTTAATTATGATAGCAACCCTCAAAGAATAAAAAATCAAATTGCTATTCCAAACTCTTACACTAAGATTTTAAA
AGGCGATAATTTTAAAGAATGTTACCAAGTGCCAAATCATGAAGTAGAAGATGAGAATATAAAAAAATATAAGGTTAATT
GTGATAAAATATAA
GTGAAAAAACTCATACTTTTGCCATTGTTATCCACTCTAGCTTTTGCTGATTACACACAATATAAACCGAGTGAAGATTT
TGCAAAGTATTTTACTAAACAAAACTGCTCTCAAGTTTTAGATAAGTTTTATTATCTAAATTGTTATGATTATAATTATA
AAGGCACTAAAGCTGTAGCTTATAAATTAGAAGCGGAAAATTTAAAAGGCGAACAAATTAAAAAACGCCCACGATTTGAA
GATGATACAAATATACCTAAAAAATACCGCACTACATGGAGTGATTATAAAAACAGCGGTTATGATAGAGGGCATACTAT
TTCTAATGCTTCAATGAGAAAAACAACTCAAGCCCAAAGAAGCACTTTTTTAATGAGTAATATTACTCCGCAAAATCCAC
AGATCAATCAAAGGGTTTGGAACAAGATTGAAAAAAGAGAAAGACAAGTAGCTTTAAAACTTGGAAGTTTAGAAGTTTTA
AATTTGGTTAATTATGATAGCAACCCTCAAAGAATAAAAAATCAAATTGCTATTCCAAACTCTTACACTAAGATTTTAAA
AGGCGATAATTTTAAAGAATGTTACCAAGTGCCAAATCATGAAGTAGAAGATGAGAATATAAAAAAATATAAGGTTAATT
GTGATAAAATATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| CJE0566 | Campylobacter jejuni RM1221 |
93.088 |
100 |
0.931 |
| CJE1441 | Campylobacter jejuni RM1221 |
92.093 |
99.078 |
0.912 |