Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | RC21_RS05175 | Genome accession | NZ_CP010488 |
| Coordinates | 976242..976544 (+) | Length | 100 a.a. |
| NCBI ID | WP_002932767.1 | Uniprot ID | A0A5T1CZF9 |
| Organism | Campylobacter jejuni strain CJ677CC092 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 971242..981544
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RC21_RS05150 (RC21_05150) | rpsR | 971604..971864 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| RC21_RS05155 (RC21_05155) | lon | 971925..974300 (-) | 2376 | WP_002866098.1 | endopeptidase La | - |
| RC21_RS05160 (RC21_05160) | - | 974317..974964 (-) | 648 | WP_002877748.1 | outer membrane protein assembly factor BamD | - |
| RC21_RS05165 (RC21_05165) | fliW | 975125..975514 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| RC21_RS05170 (RC21_05170) | proC | 975514..976245 (+) | 732 | WP_002932769.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| RC21_RS05175 (RC21_05175) | ctsT | 976242..976544 (+) | 303 | WP_002932767.1 | transformation system protein | Machinery gene |
| RC21_RS05180 (RC21_05180) | - | 976541..977203 (+) | 663 | WP_002866103.1 | hypothetical protein | - |
| RC21_RS05185 (RC21_05185) | - | 977200..977652 (+) | 453 | WP_002869049.1 | hypothetical protein | - |
| RC21_RS05190 (RC21_05190) | hemD | 977649..978278 (-) | 630 | WP_002932761.1 | uroporphyrinogen-III synthase | - |
| RC21_RS05195 (RC21_05195) | thiE | 978256..978888 (-) | 633 | WP_002932757.1 | thiamine phosphate synthase | - |
| RC21_RS05200 (RC21_05200) | thiD | 978878..979690 (-) | 813 | WP_002869047.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| RC21_RS05205 (RC21_05205) | - | 979687..980373 (-) | 687 | WP_002932755.1 | 3-methyladenine DNA glycosylase | - |
| RC21_RS05210 (RC21_05210) | - | 980370..981131 (-) | 762 | WP_002932753.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12120.19 Da Isoelectric Point: 6.2957
>NTDB_id=138226 RC21_RS05175 WP_002932767.1 976242..976544(+) (ctsT) [Campylobacter jejuni strain CJ677CC092]
MKKAFILIESISAITIISLIFIGIFYYYAQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYAQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=138226 RC21_RS05175 WP_002932767.1 976242..976544(+) (ctsT) [Campylobacter jejuni strain CJ677CC092]
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATGCTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATGCTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |