Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | RB97_RS05165 | Genome accession | NZ_CP010487 |
| Coordinates | 973067..973369 (+) | Length | 100 a.a. |
| NCBI ID | WP_002932767.1 | Uniprot ID | A0A5T1CZF9 |
| Organism | Campylobacter jejuni strain CJ677CC012 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 968067..978369
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RB97_RS05140 (RB97_05135) | rpsR | 968429..968689 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| RB97_RS05145 (RB97_05140) | lon | 968750..971125 (-) | 2376 | WP_002866098.1 | endopeptidase La | - |
| RB97_RS05150 (RB97_05145) | - | 971142..971789 (-) | 648 | WP_002877748.1 | outer membrane protein assembly factor BamD | - |
| RB97_RS05155 (RB97_05150) | fliW | 971950..972339 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| RB97_RS05160 (RB97_05155) | proC | 972339..973070 (+) | 732 | WP_002932769.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| RB97_RS05165 (RB97_05160) | ctsT | 973067..973369 (+) | 303 | WP_002932767.1 | transformation system protein | Machinery gene |
| RB97_RS05170 (RB97_05165) | - | 973366..974028 (+) | 663 | WP_002866103.1 | hypothetical protein | - |
| RB97_RS05175 (RB97_05170) | - | 974025..974477 (+) | 453 | WP_002869049.1 | hypothetical protein | - |
| RB97_RS05180 (RB97_05175) | hemD | 974474..975103 (-) | 630 | WP_002932761.1 | uroporphyrinogen-III synthase | - |
| RB97_RS05185 (RB97_05180) | thiE | 975081..975713 (-) | 633 | WP_002932757.1 | thiamine phosphate synthase | - |
| RB97_RS05190 (RB97_05185) | thiD | 975703..976515 (-) | 813 | WP_002869047.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| RB97_RS05195 (RB97_05190) | - | 976512..977198 (-) | 687 | WP_002932755.1 | 3-methyladenine DNA glycosylase | - |
| RB97_RS05200 (RB97_05195) | - | 977195..977956 (-) | 762 | WP_002856328.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12120.19 Da Isoelectric Point: 6.2957
>NTDB_id=138200 RB97_RS05165 WP_002932767.1 973067..973369(+) (ctsT) [Campylobacter jejuni strain CJ677CC012]
MKKAFILIESISAITIISLIFIGIFYYYAQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYAQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=138200 RB97_RS05165 WP_002932767.1 973067..973369(+) (ctsT) [Campylobacter jejuni strain CJ677CC012]
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATGCTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATGCTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |