Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   RC00_RS06475 Genome accession   NZ_CP010481
Coordinates   1231784..1232752 (+) Length   322 a.a.
NCBI ID   WP_002934383.1    Uniprot ID   A0A5Y9ZMN9
Organism   Campylobacter jejuni strain CJ677CC016     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1226784..1237752
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RC00_RS06450 (RC00_06460) cdsA 1227694..1228419 (-) 726 WP_002934389.1 phosphatidate cytidylyltransferase -
  RC00_RS06455 (RC00_06465) - 1228428..1228766 (-) 339 WP_002855905.1 hypothetical protein -
  RC00_RS06460 (RC00_06470) - 1228768..1230075 (-) 1308 WP_002934388.1 NFACT family protein -
  RC00_RS06465 (RC00_06475) mobA 1230137..1230712 (+) 576 WP_002934387.1 molybdenum cofactor guanylyltransferase -
  RC00_RS06470 (RC00_06480) pldA 1230709..1231698 (+) 990 WP_002934386.1 phospholipase A -
  RC00_RS06475 (RC00_06485) ceuB 1231784..1232752 (+) 969 WP_002934383.1 ABC transporter permease Machinery gene
  RC00_RS06480 (RC00_06490) ceuC 1232745..1233683 (+) 939 WP_002867309.1 iron chelate uptake ABC transporter family permease subunit -
  RC00_RS06485 (RC00_06495) ceuD 1233680..1234435 (+) 756 WP_002934382.1 ABC transporter ATP-binding protein -
  RC00_RS06490 (RC00_06500) ceuB 1234448..1235440 (+) 993 WP_002934381.1 enterochelin ABC transporter substrate-binding protein CeuB -
  RC00_RS06500 (RC00_06510) - 1235666..1236220 (-) 555 WP_002934378.1 hypothetical protein -

Sequence

Protein


Download         Length: 322 a.a.        Molecular weight: 35439.37 Da        Isoelectric Point: 9.6678

>NTDB_id=138050 RC00_RS06475 WP_002934383.1 1231784..1232752(+) (ceuB) [Campylobacter jejuni strain CJ677CC016]
MFFKHILSLKVLIALLLFFGMISLFIGVISINVKDILNLNSTQLEIITLTRIPRLIAILLTGMSLSICGLIMQQLTQNKF
VSPTTAGTMDCAKFGILISLIFFAGASFFTQAIIASVFALLGSFIFIQILRKIKLKDVIFIPLIGLMFGGIISAITTFFA
YALNYIQNIQGWLQGSMANVMQGNYELLYISLPLFILAYFLAHKITIVGMGEDIALNLGISYNGILFLGLMIVSIITSLV
IVSVGIIPFLGLIIPNLVALYLGDNLRKNLIYIALCGALFLLVCDIISRLVIFPFEMPLSITTGVLGSLIFIFLLLKRKV
YA

Nucleotide


Download         Length: 969 bp        

>NTDB_id=138050 RC00_RS06475 WP_002934383.1 1231784..1232752(+) (ceuB) [Campylobacter jejuni strain CJ677CC016]
TTGTTTTTTAAACATATATTGAGTTTAAAAGTGCTTATAGCTTTACTTTTATTCTTTGGAATGATAAGTTTATTTATAGG
AGTTATCAGTATCAATGTAAAAGATATTCTTAATCTTAACTCCACTCAACTAGAAATCATAACTCTCACAAGAATTCCTA
GACTTATAGCGATTTTACTCACAGGAATGAGTCTTAGTATATGCGGGCTTATCATGCAGCAACTCACGCAAAATAAATTC
GTTTCTCCAACTACAGCAGGAACTATGGATTGTGCTAAATTTGGCATACTTATTTCTTTAATATTTTTTGCTGGAGCGTC
TTTTTTCACTCAAGCTATCATTGCTTCTGTATTTGCACTTTTGGGTTCTTTTATATTTATCCAAATTTTAAGAAAAATCA
AACTCAAAGATGTGATTTTTATACCTTTGATAGGCTTGATGTTTGGAGGCATTATTAGTGCTATAACTACTTTTTTTGCC
TATGCTTTAAATTATATACAAAATATCCAAGGCTGGTTACAAGGCAGTATGGCAAATGTTATGCAGGGAAATTATGAATT
ACTTTACATTTCTTTACCACTTTTTATACTTGCTTATTTTTTAGCTCATAAAATTACCATAGTTGGCATGGGCGAAGATA
TAGCTTTAAATCTTGGAATTTCTTATAATGGCATATTATTTTTAGGCTTGATGATTGTAAGCATTATCACTAGCTTAGTG
ATTGTAAGCGTTGGGATTATCCCTTTTTTAGGACTAATTATCCCAAATTTAGTAGCTCTTTATCTAGGTGATAATCTTAG
AAAAAATCTTATCTATATAGCACTTTGTGGAGCTTTGTTTTTACTTGTTTGCGATATCATTTCAAGACTTGTCATCTTTC
CTTTTGAGATGCCTTTAAGTATCACTACAGGTGTTTTAGGATCTTTAATCTTTATCTTTCTTTTACTAAAAAGGAAAGTT
TATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(15-317)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5Y9ZMN9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

99.379

100

0.994

Multiple sequence alignment