Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | RC30_RS05515 | Genome accession | NZ_CP010480 |
| Coordinates | 1045320..1045622 (+) | Length | 100 a.a. |
| NCBI ID | WP_002932767.1 | Uniprot ID | A0A5T1CZF9 |
| Organism | Campylobacter jejuni strain CJ677CC524 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1040320..1050622
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RC30_RS05490 (RC30_05470) | rpsR | 1040682..1040942 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| RC30_RS05495 (RC30_05475) | lon | 1041003..1043378 (-) | 2376 | WP_002866098.1 | endopeptidase La | - |
| RC30_RS05500 (RC30_05480) | - | 1043395..1044042 (-) | 648 | WP_002877748.1 | outer membrane protein assembly factor BamD | - |
| RC30_RS05505 (RC30_05485) | fliW | 1044203..1044592 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| RC30_RS05510 (RC30_05490) | proC | 1044592..1045323 (+) | 732 | WP_002932769.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| RC30_RS05515 (RC30_05495) | ctsT | 1045320..1045622 (+) | 303 | WP_002932767.1 | transformation system protein | Machinery gene |
| RC30_RS05520 (RC30_05500) | - | 1045619..1046281 (+) | 663 | WP_002866103.1 | hypothetical protein | - |
| RC30_RS05525 (RC30_05505) | - | 1046278..1046730 (+) | 453 | WP_002869049.1 | hypothetical protein | - |
| RC30_RS05530 (RC30_05510) | hemD | 1046727..1047356 (-) | 630 | WP_002932761.1 | uroporphyrinogen-III synthase | - |
| RC30_RS05535 (RC30_05515) | thiE | 1047334..1047966 (-) | 633 | WP_002932757.1 | thiamine phosphate synthase | - |
| RC30_RS05540 (RC30_05520) | thiD | 1047956..1048768 (-) | 813 | WP_002869047.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| RC30_RS05545 (RC30_05525) | - | 1048765..1049451 (-) | 687 | WP_002932755.1 | 3-methyladenine DNA glycosylase | - |
| RC30_RS05550 (RC30_05530) | - | 1049448..1050209 (-) | 762 | WP_002932753.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12120.19 Da Isoelectric Point: 6.2957
>NTDB_id=138021 RC30_RS05515 WP_002932767.1 1045320..1045622(+) (ctsT) [Campylobacter jejuni strain CJ677CC524]
MKKAFILIESISAITIISLIFIGIFYYYAQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYAQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=138021 RC30_RS05515 WP_002932767.1 1045320..1045622(+) (ctsT) [Campylobacter jejuni strain CJ677CC524]
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATGCTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATGCTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |