Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | RC06_RS05300 | Genome accession | NZ_CP010479 |
| Coordinates | 1001872..1002174 (+) | Length | 100 a.a. |
| NCBI ID | WP_002932767.1 | Uniprot ID | A0A5T1CZF9 |
| Organism | Campylobacter jejuni strain CJ677CC036 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 996872..1007174
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RC06_RS05275 (RC06_05275) | rpsR | 997234..997494 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| RC06_RS05280 (RC06_05280) | lon | 997555..999930 (-) | 2376 | WP_002866098.1 | endopeptidase La | - |
| RC06_RS05285 (RC06_05285) | - | 999947..1000594 (-) | 648 | WP_002877748.1 | outer membrane protein assembly factor BamD | - |
| RC06_RS05290 (RC06_05290) | fliW | 1000755..1001144 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| RC06_RS05295 (RC06_05295) | proC | 1001144..1001875 (+) | 732 | WP_002932769.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| RC06_RS05300 (RC06_05300) | ctsT | 1001872..1002174 (+) | 303 | WP_002932767.1 | transformation system protein | Machinery gene |
| RC06_RS05305 (RC06_05305) | - | 1002171..1002833 (+) | 663 | WP_002866103.1 | hypothetical protein | - |
| RC06_RS05310 (RC06_05310) | - | 1002830..1003282 (+) | 453 | WP_002869049.1 | hypothetical protein | - |
| RC06_RS05315 (RC06_05315) | hemD | 1003279..1003908 (-) | 630 | WP_002932761.1 | uroporphyrinogen-III synthase | - |
| RC06_RS05320 (RC06_05320) | thiE | 1003886..1004518 (-) | 633 | WP_002932757.1 | thiamine phosphate synthase | - |
| RC06_RS05325 (RC06_05325) | thiD | 1004508..1005320 (-) | 813 | WP_002869047.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| RC06_RS05330 (RC06_05330) | - | 1005317..1006003 (-) | 687 | WP_002932755.1 | 3-methyladenine DNA glycosylase | - |
| RC06_RS05335 (RC06_05335) | - | 1006000..1006761 (-) | 762 | WP_002932753.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12120.19 Da Isoelectric Point: 6.2957
>NTDB_id=137991 RC06_RS05300 WP_002932767.1 1001872..1002174(+) (ctsT) [Campylobacter jejuni strain CJ677CC036]
MKKAFILIESISAITIISLIFIGIFYYYAQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYAQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=137991 RC06_RS05300 WP_002932767.1 1001872..1002174(+) (ctsT) [Campylobacter jejuni strain CJ677CC036]
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATGCTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATGCTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |