Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | RC32_RS05375 | Genome accession | NZ_CP010477 |
| Coordinates | 1011080..1011382 (+) | Length | 100 a.a. |
| NCBI ID | WP_002932767.1 | Uniprot ID | A0A5T1CZF9 |
| Organism | Campylobacter jejuni strain CJ677CC526 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1006080..1016382
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RC32_RS05350 (RC32_05360) | rpsR | 1006442..1006702 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| RC32_RS05355 (RC32_05365) | lon | 1006763..1009138 (-) | 2376 | WP_002866098.1 | endopeptidase La | - |
| RC32_RS05360 (RC32_05370) | - | 1009155..1009802 (-) | 648 | WP_002877748.1 | outer membrane protein assembly factor BamD | - |
| RC32_RS05365 (RC32_05375) | fliW | 1009963..1010352 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| RC32_RS05370 (RC32_05380) | proC | 1010352..1011083 (+) | 732 | WP_002932769.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| RC32_RS05375 (RC32_05385) | ctsT | 1011080..1011382 (+) | 303 | WP_002932767.1 | transformation system protein | Machinery gene |
| RC32_RS05380 (RC32_05390) | - | 1011379..1012041 (+) | 663 | WP_002866103.1 | hypothetical protein | - |
| RC32_RS05385 (RC32_05395) | - | 1012038..1012490 (+) | 453 | WP_002869049.1 | hypothetical protein | - |
| RC32_RS05390 (RC32_05400) | hemD | 1012487..1013116 (-) | 630 | WP_002932761.1 | uroporphyrinogen-III synthase | - |
| RC32_RS05395 (RC32_05405) | thiE | 1013094..1013726 (-) | 633 | WP_002932757.1 | thiamine phosphate synthase | - |
| RC32_RS05400 (RC32_05410) | thiD | 1013716..1014528 (-) | 813 | WP_002869047.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| RC32_RS05405 (RC32_05415) | - | 1014525..1015211 (-) | 687 | WP_002932755.1 | 3-methyladenine DNA glycosylase | - |
| RC32_RS05410 (RC32_05420) | - | 1015208..1015969 (-) | 762 | WP_002932753.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12120.19 Da Isoelectric Point: 6.2957
>NTDB_id=137965 RC32_RS05375 WP_002932767.1 1011080..1011382(+) (ctsT) [Campylobacter jejuni strain CJ677CC526]
MKKAFILIESISAITIISLIFIGIFYYYAQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYAQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=137965 RC32_RS05375 WP_002932767.1 1011080..1011382(+) (ctsT) [Campylobacter jejuni strain CJ677CC526]
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATGCTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATGCTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |