Detailed information    

insolico Bioinformatically predicted

Overview


Name   braR   Type   Regulator
Locus tag   SAST43_RS03255 Genome accession   NZ_CP012974
Coordinates   674592..675266 (+) Length   224 a.a.
NCBI ID   WP_001166500.1    Uniprot ID   Q99VW2
Organism   Staphylococcus aureus strain ST20130943     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 669592..680266
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SAST43_RS03225 (SAST43_00586) - 669807..670874 (+) 1068 WP_000980136.1 membrane protein -
  SAST43_RS03230 (SAST43_00587) - 671025..672068 (+) 1044 WP_001030769.1 alpha/beta hydrolase -
  SAST43_RS03240 (SAST43_00588) - 672397..672825 (+) 429 WP_000198504.1 hypothetical protein -
  SAST43_RS03245 (SAST43_03129) - 673034..673540 (-) 507 WP_000940129.1 GNAT family N-acetyltransferase -
  SAST43_RS03250 (SAST43_00590) graX 673653..674576 (+) 924 WP_000802955.1 auxiliary protein GraX/ApsX -
  SAST43_RS03255 (SAST43_00591) braR 674592..675266 (+) 675 WP_001166500.1 response regulator transcription factor GraR/ApsR Regulator
  SAST43_RS03260 (SAST43_03130) graS 675259..676299 (+) 1041 WP_001061256.1 histidine kinase GraS/ApsS -
  SAST43_RS03265 (SAST43_00593) vraF 676443..677204 (+) 762 WP_000985996.1 ABC transporter ATP-binding protein VraF -
  SAST43_RS03270 (SAST43_03131) vraG 677194..679083 (+) 1890 WP_000143616.1 ABC transporter permease VraG -

Sequence


Protein


Download         Length: 224 a.a.        Molecular weight: 26065.87 Da        Isoelectric Point: 4.3563

>NTDB_id=137959 SAST43_RS03255 WP_001166500.1 674592..675266(+) (braR) [Staphylococcus aureus strain ST20130943]
MQILLVEDDNTLFQELKKELEQWDFNVAGIEDFGKVMDTFESFNPEIVILDVQLPKYDGFYWCRKMREVSNVPILFLSSR
DNPMDQVMSMELGADDYMQKPFYTNVLIAKLQAIYRRVYEFTAEEKRTLTWQDAVVDLSKDSIQKGDDTIFLSKTEMIIL
EILITKKNQIVSRDTIITALWDDEAFVSDNTLTVNVNRLRKKLSEISMDSAIETKVGKGYMAHE

Nucleotide


Download         Length: 675 bp        

>NTDB_id=137959 SAST43_RS03255 WP_001166500.1 674592..675266(+) (braR) [Staphylococcus aureus strain ST20130943]
ATGCAAATACTACTAGTAGAAGATGACAATACTTTGTTTCAAGAATTGAAAAAAGAATTAGAACAATGGGATTTTAATGT
TGCTGGTATTGAAGATTTTGGCAAAGTAATGGATACATTTGAAAGTTTTAATCCTGAAATTGTTATATTGGATGTTCAAT
TACCTAAATATGATGGGTTTTATTGGTGCAGAAAAATGAGAGAAGTTTCCAACGTACCAATATTATTTTTATCATCTCGT
GATAATCCAATGGATCAAGTGATGAGTATGGAACTTGGCGCAGATGATTATATGCAAAAGCCTTTTTATACAAATGTATT
AATTGCTAAATTACAAGCGATTTATCGTCGTGTCTATGAGTTTACAGCTGAAGAAAAACGTACATTGACTTGGCAAGATG
CTGTCGTTGATCTATCAAAAGATAGTATACAAAAAGGTGACGATACGATTTTCCTGTCCAAAACAGAAATGATTATATTA
GAAATTCTTATTACCAAAAAAAATCAAATCGTTTCGAGAGATACAATTATCACTGCATTATGGGATGATGAAGCATTTGT
TAGTGATAATACGTTAACAGTAAATGTGAATCGTTTACGAAAAAAATTATCTGAAATTAGTATGGATAGTGCAATCGAAA
CAAAAGTAGGAAAAGGATATATGGCTCATGAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q99VW2

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

40.455

98.214

0.397