Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | RC27_RS04875 | Genome accession | NZ_CP010476 |
| Coordinates | 915032..915334 (+) | Length | 100 a.a. |
| NCBI ID | WP_002932767.1 | Uniprot ID | A0A5T1CZF9 |
| Organism | Campylobacter jejuni strain CJ677CC521 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 910032..920334
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RC27_RS04850 (RC27_04845) | rpsR | 910394..910654 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| RC27_RS04855 (RC27_04850) | lon | 910715..913090 (-) | 2376 | WP_002866098.1 | endopeptidase La | - |
| RC27_RS04860 (RC27_04855) | - | 913107..913754 (-) | 648 | WP_002877748.1 | outer membrane protein assembly factor BamD | - |
| RC27_RS04865 (RC27_04860) | fliW | 913915..914304 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| RC27_RS04870 (RC27_04865) | proC | 914304..915035 (+) | 732 | WP_002932769.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| RC27_RS04875 (RC27_04870) | ctsT | 915032..915334 (+) | 303 | WP_002932767.1 | transformation system protein | Machinery gene |
| RC27_RS04880 (RC27_04875) | - | 915331..915993 (+) | 663 | WP_002866103.1 | hypothetical protein | - |
| RC27_RS04885 (RC27_04880) | - | 915990..916442 (+) | 453 | WP_002869049.1 | hypothetical protein | - |
| RC27_RS04890 (RC27_04885) | hemD | 916439..917068 (-) | 630 | WP_002932761.1 | uroporphyrinogen-III synthase | - |
| RC27_RS04895 (RC27_04890) | thiE | 917046..917678 (-) | 633 | WP_002932757.1 | thiamine phosphate synthase | - |
| RC27_RS04900 (RC27_04895) | thiD | 917668..918480 (-) | 813 | WP_002869047.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| RC27_RS04905 (RC27_04900) | - | 918477..919163 (-) | 687 | WP_002932755.1 | 3-methyladenine DNA glycosylase | - |
| RC27_RS04910 (RC27_04905) | - | 919160..919921 (-) | 762 | WP_002932753.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12120.19 Da Isoelectric Point: 6.2957
>NTDB_id=137938 RC27_RS04875 WP_002932767.1 915032..915334(+) (ctsT) [Campylobacter jejuni strain CJ677CC521]
MKKAFILIESISAITIISLIFIGIFYYYAQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYAQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=137938 RC27_RS04875 WP_002932767.1 915032..915334(+) (ctsT) [Campylobacter jejuni strain CJ677CC521]
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATGCTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATGCTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |